Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
COL23A1Q86Y22 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC24.25■■□□□ 1.47
COL23A1Q86Y22 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL23A1Q86Y22 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
COL23A1Q86Y22 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
COL23A1Q86Y22 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL23A1Q86Y22 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
COL23A1Q86Y22 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 DRAXINP1-201ENST00000437611 948 ntBASIC24.24■■□□□ 1.47
COL23A1Q86Y22 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 CALM3-211ENST00000598871 561 ntTSL 4 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL23A1Q86Y22 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 LINC00265-3P-201ENST00000447588 903 ntBASIC24.23■■□□□ 1.47
COL23A1Q86Y22 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL23A1Q86Y22 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 AP001271.2-201ENST00000624018 1556 ntBASIC24.22■■□□□ 1.47
COL23A1Q86Y22 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 BMF-207ENST00000559701 630 ntTSL 3 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL23A1Q86Y22 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 HLA-A-201ENST00000376802 1334 ntBASIC24.21■■□□□ 1.47
COL23A1Q86Y22 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 TSPY22P-201ENST00000427496 604 ntBASIC24.21■■□□□ 1.47
COL23A1Q86Y22 HLA-F-220ENST00000434407 884 ntBASIC24.21■■□□□ 1.47
COL23A1Q86Y22 AL662844.1-201ENST00000546340 181 ntBASIC24.21■■□□□ 1.47
COL23A1Q86Y22 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL23A1Q86Y22 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL23A1Q86Y22 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
COL23A1Q86Y22 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 TEX30-205ENST00000376029 959 ntTSL 2 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.2■■□□□ 1.46
COL23A1Q86Y22 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC24.19■■□□□ 1.46
COL23A1Q86Y22 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL23A1Q86Y22 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL23A1Q86Y22 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
COL23A1Q86Y22 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL23A1Q86Y22 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL23A1Q86Y22 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms