Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 HCG11-201ENST00000411553 5696 ntBASIC17.74■□□□□ 0.43
ZNF550Q7Z398 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 AL596275.1-201ENST00000423464 877 ntBASIC17.73■□□□□ 0.43
ZNF550Q7Z398 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 RN7SL471P-201ENST00000580476 299 ntBASIC17.73■□□□□ 0.43
ZNF550Q7Z398 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 AC104417.2-201ENST00000562989 1793 ntBASIC17.73■□□□□ 0.43
ZNF550Q7Z398 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF550Q7Z398 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 LINC01465-201ENST00000408887 1940 ntBASIC17.72■□□□□ 0.43
ZNF550Q7Z398 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 UBE2SP1-201ENST00000450587 669 ntBASIC17.72■□□□□ 0.43
ZNF550Q7Z398 AC008550.1-201ENST00000511500 884 ntBASIC17.72■□□□□ 0.43
ZNF550Q7Z398 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 AC004264.1-201ENST00000608354 794 ntBASIC17.72■□□□□ 0.43
ZNF550Q7Z398 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 AC141586.3-201ENST00000562166 1838 ntBASIC17.72■□□□□ 0.43
ZNF550Q7Z398 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
ZNF550Q7Z398 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 NBPF21P-201ENST00000425093 1451 ntBASIC17.71■□□□□ 0.43
ZNF550Q7Z398 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 RNF165-205ENST00000588679 2904 ntBASIC17.71■□□□□ 0.43
ZNF550Q7Z398 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ZNF550Q7Z398 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF550Q7Z398 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF550Q7Z398 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF550Q7Z398 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.71■□□□□ 0.42
ZNF550Q7Z398 AP000974.1-201ENST00000623909 2387 ntBASIC17.71■□□□□ 0.42
ZNF550Q7Z398 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ZNF550Q7Z398 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms