Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 KRT17P2-201ENST00000300992 1314 ntBASIC12.72□□□□□ -0.37
SCXQ7RTU7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 AC121338.2-201ENST00000622535 1744 ntBASIC12.72□□□□□ -0.37
SCXQ7RTU7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 AC073314.1-201ENST00000568729 2216 ntBASIC12.72□□□□□ -0.37
SCXQ7RTU7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCXQ7RTU7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SCXQ7RTU7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 OR6D1P-202ENST00000641007 5290 ntBASIC12.71□□□□□ -0.37
SCXQ7RTU7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 RARRES2P10-201ENST00000564312 460 ntBASIC12.71□□□□□ -0.37
SCXQ7RTU7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 MIR4785-201ENST00000585005 73 ntBASIC12.71□□□□□ -0.37
SCXQ7RTU7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SCXQ7RTU7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCXQ7RTU7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.71□□□□□ -0.38
SCXQ7RTU7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCXQ7RTU7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SCXQ7RTU7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
SCXQ7RTU7 AC124283.5-201ENST00000624661 1809 ntBASIC12.71□□□□□ -0.38
SCXQ7RTU7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SCXQ7RTU7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC12.71□□□□□ -0.38
SCXQ7RTU7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCXQ7RTU7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.71□□□□□ -0.38
SCXQ7RTU7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.71□□□□□ -0.38
SCXQ7RTU7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCXQ7RTU7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCXQ7RTU7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 AC112907.3-201ENST00000577781 2400 ntBASIC12.7□□□□□ -0.38
SCXQ7RTU7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms