Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.581e-6■■□□□ 13.8
LARP4Q71RC2 CTNNA1-211ENST00000518910 572 ntTSL 411.34□□□□□ -0.591e-6■■□□□ 13.8
LARP4Q71RC2 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.04□□□□□ -0.649e-14■■□□□ 13.8
LARP4Q71RC2 CENPE-206ENST00000514974 581 ntTSL 511.02□□□□□ -0.651e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.671e-6■■□□□ 13.8
LARP4Q71RC2 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.681e-6■■□□□ 13.8
LARP4Q71RC2 SRSF5-212ENST00000556184 2443 ntTSL 1 (best)10.63□□□□□ -0.713e-52■■□□□ 13.8
LARP4Q71RC2 PPP2R5C-209ENST00000553890 492 ntTSL 310.59□□□□□ -0.715e-8■■□□□ 13.8
LARP4Q71RC2 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.46□□□□□ -0.739e-14■■□□□ 13.8
LARP4Q71RC2 PTBP1-205ENST00000585535 314 ntTSL 310.43□□□□□ -0.741e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-235ENST00000475823 371 ntTSL 310.19□□□□□ -0.781e-6■■□□□ 13.8
LARP4Q71RC2 SRSF5-208ENST00000554929 947 ntTSL 210.11□□□□□ -0.793e-52■■□□□ 13.8
LARP4Q71RC2 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.841e-6■■□□□ 13.8
LARP4Q71RC2 CTNNA1-230ENST00000521724 2741 ntTSL 29.59□□□□□ -0.871e-6■■□□□ 13.8
LARP4Q71RC2 EHBP1-205ENST00000413434 533 ntTSL 49.57□□□□□ -0.881e-6■■□□□ 13.8
LARP4Q71RC2 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC9.42□□□□□ -0.95e-8■■□□□ 13.8
LARP4Q71RC2 SEPT2-214ENST00000428524 644 ntTSL 59.14□□□□□ -0.951e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-224ENST00000457335 570 ntTSL 49.08□□□□□ -0.961e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-212ENST00000425899 738 ntTSL 58.93□□□□□ -0.981e-6■■□□□ 13.8
LARP4Q71RC2 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.983e-52■■□□□ 13.8
LARP4Q71RC2 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC8.84□□□□□ -0.995e-8■■□□□ 13.8
LARP4Q71RC2 EHBP1-217ENST00000472809 1374 ntTSL 58.76□□□□□ -1.011e-6■■□□□ 13.8
LARP4Q71RC2 SRSF5-211ENST00000555547 2057 ntTSL 58.52□□□□□ -1.053e-52■■□□□ 13.8
LARP4Q71RC2 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.5□□□□□ -1.051e-6■■□□□ 13.8
LARP4Q71RC2 SRSF5-216ENST00000556647 644 ntTSL 28.43□□□□□ -1.063e-52■■□□□ 13.8
LARP4Q71RC2 EHBP1-211ENST00000449820 539 ntTSL 58.34□□□□□ -1.071e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-230ENST00000467971 571 ntTSL 28.23□□□□□ -1.091e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-202ENST00000366210 672 ntTSL 38.11□□□□□ -1.111e-6■■□□□ 13.8
LARP4Q71RC2 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.131e-6■■□□□ 13.8
LARP4Q71RC2 SRSF5-207ENST00000554465 3044 ntTSL 1 (best)7.89□□□□□ -1.153e-52■■□□□ 13.8
LARP4Q71RC2 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.51□□□□□ -1.211e-6■■□□□ 13.8
LARP4Q71RC2 CTNNA1-215ENST00000519309 869 ntTSL 37.47□□□□□ -1.211e-6■■□□□ 13.8
LARP4Q71RC2 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.221e-6■■□□□ 13.8
LARP4Q71RC2 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.241e-6■■□□□ 13.8
LARP4Q71RC2 AC008982.1-202ENST00000602021 342 ntTSL 57.25□□□□□ -1.251e-6■■□□□ 13.8
LARP4Q71RC2 CDC42BPA-208ENST00000442054 3786 ntTSL 1 (best)7.2□□□□□ -1.261e-6■■□□□ 13.8
LARP4Q71RC2 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.18□□□□□ -1.261e-6■■□□□ 13.8
LARP4Q71RC2 EHBP1-207ENST00000426940 586 ntTSL 47.02□□□□□ -1.291e-6■■□□□ 13.8
LARP4Q71RC2 HNRNPR-205ENST00000463552 837 ntTSL 46.92□□□□□ -1.31e-6■■□□□ 13.8
LARP4Q71RC2 HNRNPR-208ENST00000476451 814 ntTSL 46.92□□□□□ -1.31e-6■■□□□ 13.8
LARP4Q71RC2 PPP2R5C-215ENST00000556068 3363 ntTSL 26.81□□□□□ -1.325e-8■■□□□ 13.8
LARP4Q71RC2 SEPT2-207ENST00000407017 650 ntTSL 46.78□□□□□ -1.321e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-221ENST00000445030 575 ntTSL 36.78□□□□□ -1.321e-6■■□□□ 13.8
LARP4Q71RC2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.351e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-219ENST00000441533 372 ntTSL 56.61□□□□□ -1.351e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-228ENST00000464128 565 ntTSL 46.24□□□□□ -1.411e-6■■□□□ 13.8
LARP4Q71RC2 HNRNPR-207ENST00000470941 560 ntTSL 46.08□□□□□ -1.441e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-220ENST00000443492 558 ntTSL 55.77□□□□□ -1.491e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-222ENST00000449239 599 ntTSL 25.65□□□□□ -1.51e-6■■□□□ 13.8
LARP4Q71RC2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.55□□□□□ -1.521e-6■■□□□ 13.8
LARP4Q71RC2 EHBP1-208ENST00000427809 581 ntTSL 45.54□□□□□ -1.521e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-233ENST00000473479 659 ntTSL 25.47□□□□□ -1.531e-6■■□□□ 13.8
LARP4Q71RC2 CDC42BPA-209ENST00000448940 7355 ntTSL 1 (best)5.34□□□□□ -1.561e-6■■□□□ 13.8
LARP4Q71RC2 CTNNA1-212ENST00000518919 498 ntTSL 1 (best)5.29□□□□□ -1.561e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-241ENST00000484740 563 ntTSL 35.27□□□□□ -1.571e-6■■□□□ 13.8
LARP4Q71RC2 CTNNA1-219ENST00000520158 719 ntTSL 35.1□□□□□ -1.591e-6■■□□□ 13.8
LARP4Q71RC2 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)5.03□□□□□ -1.61e-6■■□□□ 13.8
LARP4Q71RC2 GARS-205ENST00000470392 469 ntTSL 54.9□□□□□ -1.631e-6■■□□□ 13.8
LARP4Q71RC2 PPP2R5C-213ENST00000554504 448 ntTSL 34.84□□□□□ -1.635e-8■■□□□ 13.8
LARP4Q71RC2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.74□□□□□ -1.659e-14■■□□□ 13.8
LARP4Q71RC2 CDC42BPA-207ENST00000441725 2183 ntTSL 54.65□□□□□ -1.661e-6■■□□□ 13.8
LARP4Q71RC2 CDC42BPA-213ENST00000488131 1859 ntTSL 54.64□□□□□ -1.671e-6■■□□□ 13.8
LARP4Q71RC2 CTNNA1-209ENST00000518585 568 ntTSL 44.19□□□□□ -1.741e-6■■□□□ 13.8
LARP4Q71RC2 SEPT2-232ENST00000469434 583 ntTSL 34.15□□□□□ -1.751e-6■■□□□ 13.8
LARP4Q71RC2 CLOCK-206ENST00000506923 616 ntTSL 33.61□□□□□ -1.831e-6■■□□□ 13.8
LARP4Q71RC2 GARS-202ENST00000444666 619 ntTSL 33.35□□□□□ -1.871e-6■■□□□ 13.8
LARP4Q71RC2 FUS-209ENST00000566605 1787 ntTSL 1 (best)25.53■■□□□ 1.681e-9■■□□□ 13.8
LARP4Q71RC2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.421e-9■■□□□ 13.8
LARP4Q71RC2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.951e-9■■□□□ 13.8
LARP4Q71RC2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.041e-9■■□□□ 13.8
LARP4Q71RC2 FUS-206ENST00000487509 4920 ntTSL 212.92□□□□□ -0.341e-9■■□□□ 13.8
LARP4Q71RC2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.012e-7■■□□□ 13.8
LARP4Q71RC2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.4□□□□□ -0.262e-7■■□□□ 13.8
LARP4Q71RC2 ATP5D-206ENST00000591249 405 ntTSL 515.16■□□□□ 0.028e-9■■□□□ 13.8
LARP4Q71RC2 MRPS24-202ENST00000414932 1727 ntTSL 222.57■■□□□ 1.22e-7■■□□□ 13.8
LARP4Q71RC2 HM13-206ENST00000460389 1075 ntTSL 513.17□□□□□ -0.37e-9■■□□□ 13.8
LARP4Q71RC2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.064e-8■■□□□ 13.8
LARP4Q71RC2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.374e-8■■□□□ 13.8
LARP4Q71RC2 NDUFC2-KCTD14-204ENST00000614236 386 ntTSL 5 BASIC10.64□□□□□ -0.714e-8■■□□□ 13.8
LARP4Q71RC2 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC10.51□□□□□ -0.734e-8■■□□□ 13.8
LARP4Q71RC2 NDUFC2-203ENST00000527806 1888 ntTSL 2 BASIC9.76□□□□□ -0.854e-8■■□□□ 13.8
LARP4Q71RC2 NDUFC2-KCTD14-203ENST00000612612 530 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.884e-8■■□□□ 13.8
LARP4Q71RC2 NDUFC2-205ENST00000534029 422 ntTSL 2 BASIC8.21□□□□□ -1.14e-8■■□□□ 13.8
LARP4Q71RC2 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC8.21□□□□□ -1.14e-8■■□□□ 13.8
LARP4Q71RC2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.174e-10■■□□□ 13.8
LARP4Q71RC2 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.72□□□□□ -0.374e-10■■□□□ 13.8
LARP4Q71RC2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.28■□□□□ 0.042e-13■■□□□ 13.8
LARP4Q71RC2 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.521e-323■■□□□ 13.7
LARP4Q71RC2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.66■□□□□ 0.95e-7■■□□□ 13.7
LARP4Q71RC2 TMEM161A-209ENST00000587985 1754 ntTSL 517.02■□□□□ 0.315e-7■■□□□ 13.7
LARP4Q71RC2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.225e-7■■□□□ 13.7
LARP4Q71RC2 TMEM161A-205ENST00000587406 1923 ntTSL 516.35■□□□□ 0.215e-7■■□□□ 13.7
LARP4Q71RC2 TMEM161A-210ENST00000589448 1799 ntTSL 516.18■□□□□ 0.185e-7■■□□□ 13.7
LARP4Q71RC2 TMEM161A-213ENST00000591443 657 ntTSL 215.6■□□□□ 0.095e-7■■□□□ 13.7
LARP4Q71RC2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.09■□□□□ 0.015e-7■■□□□ 13.7
LARP4Q71RC2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.081e-22■■□□□ 13.7
LARP4Q71RC2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.5■□□□□ 0.071e-22■■□□□ 13.7
LARP4Q71RC2 HSP90B1-203ENST00000548462 3032 ntTSL 211.55□□□□□ -0.561e-22■■□□□ 13.7
LARP4Q71RC2 HSP90B1-207ENST00000550595 694 ntTSL 26.53□□□□□ -1.361e-22■■□□□ 13.7
LARP4Q71RC2 RPL36A-207ENST00000489407 373 ntTSL 26.26□□□□□ -1.413e-17■■□□□ 13.7
Retrieved 100 of 15,922 protein–RNA pairs in 259.3 ms