Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 HTR7P1-202ENST00000624664 4411 ntBASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 AC009113.1-201ENST00000570267 2443 ntBASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 AC079598.2-202ENST00000546624 1451 ntBASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTCHD4Q6ZW05 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTCHD4Q6ZW05 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PTCHD4Q6ZW05 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTCHD4Q6ZW05 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 AC023632.3-201ENST00000521633 145 ntBASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 AC080038.1-201ENST00000611274 1154 ntBASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 AC073111.5-205ENST00000641717 521 ntBASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCHD4Q6ZW05 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms