Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 MIR4651-201ENST00000582622 73 ntBASIC19.45■□□□□ 0.7
PACS1Q6VY07 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PACS1Q6VY07 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PACS1Q6VY07 CROCCP3-202ENST00000420820 1947 ntBASIC19.45■□□□□ 0.7
PACS1Q6VY07 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.44■□□□□ 0.7
PACS1Q6VY07 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PACS1Q6VY07 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PACS1Q6VY07 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.44■□□□□ 0.7
PACS1Q6VY07 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.44■□□□□ 0.7
PACS1Q6VY07 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.44■□□□□ 0.7
PACS1Q6VY07 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
PACS1Q6VY07 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.44■□□□□ 0.7
PACS1Q6VY07 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACS1Q6VY07 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 AP006587.1-201ENST00000534129 1502 ntBASIC19.43■□□□□ 0.7
PACS1Q6VY07 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 POU5F1P3-201ENST00000428824 1078 ntBASIC19.43■□□□□ 0.7
PACS1Q6VY07 YBX1P10-201ENST00000444752 975 ntBASIC19.43■□□□□ 0.7
PACS1Q6VY07 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.43■□□□□ 0.7
PACS1Q6VY07 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.43■□□□□ 0.7
PACS1Q6VY07 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.43■□□□□ 0.7
PACS1Q6VY07 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.43■□□□□ 0.7
PACS1Q6VY07 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
PACS1Q6VY07 AL138781.2-201ENST00000617896 1843 ntBASIC19.43■□□□□ 0.7
PACS1Q6VY07 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.43■□□□□ 0.7
PACS1Q6VY07 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACS1Q6VY07 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 MTDHP1-201ENST00000605323 784 ntBASIC19.42■□□□□ 0.7
PACS1Q6VY07 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms