Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 NEFHP1-201ENST00000412845 2629 ntBASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.3■□□□□ 0.36
NHLRC1Q6VVB1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NHLRC1Q6VVB1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 TSPY20P-201ENST00000450910 630 ntBASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NHLRC1Q6VVB1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms