Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 CKBP1-201ENST00000565489 1086 ntBASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SWSAP1Q6NVH7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 KRT8P11-201ENST00000409686 1436 ntBASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 RN7SL850P-201ENST00000579959 291 ntBASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SWSAP1Q6NVH7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 AC113347.1-201ENST00000413321 391 ntBASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 AC128688.1-201ENST00000487626 519 ntBASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SWSAP1Q6NVH7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 TMPOP1-202ENST00000424642 1267 ntBASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 AL137013.1-201ENST00000432946 1228 ntBASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.46■■□□□ 1.03
SWSAP1Q6NVH7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SWSAP1Q6NVH7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 TERF1P1-201ENST00000311003 1181 ntBASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 MIR1224-201ENST00000408193 85 ntBASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 SLC25A1P2-201ENST00000430693 912 ntBASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 AC116562.4-202ENST00000641738 218 ntBASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 AC092865.7-201ENST00000641832 219 ntBASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SWSAP1Q6NVH7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms