Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 AC105265.2-201ENST00000467189 838 ntBASIC18.15■□□□□ 0.5
LPCAT4Q643R3 AL031963.3-201ENST00000606441 850 ntBASIC18.15■□□□□ 0.5
LPCAT4Q643R3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 AL358852.1-201ENST00000623174 1268 ntBASIC18.15■□□□□ 0.5
LPCAT4Q643R3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 PCDHA12-202ENST00000613593 2588 ntBASIC18.15■□□□□ 0.5
LPCAT4Q643R3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 AC087633.2-202ENST00000565166 1439 ntBASIC18.15■□□□□ 0.5
LPCAT4Q643R3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.14■□□□□ 0.5
LPCAT4Q643R3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LPCAT4Q643R3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.14■□□□□ 0.5
LPCAT4Q643R3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
LPCAT4Q643R3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 AL136116.3-201ENST00000402907 1138 ntBASIC18.14■□□□□ 0.49
LPCAT4Q643R3 PGM5P4-201ENST00000421970 445 ntBASIC18.14■□□□□ 0.49
LPCAT4Q643R3 AC079140.4-201ENST00000507448 529 ntBASIC18.14■□□□□ 0.49
LPCAT4Q643R3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 TPRG1LP1-201ENST00000598702 760 ntBASIC18.14■□□□□ 0.49
LPCAT4Q643R3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.14■□□□□ 0.49
LPCAT4Q643R3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.13■□□□□ 0.49
LPCAT4Q643R3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 AL355001.2-201ENST00000620617 1191 ntBASIC18.13■□□□□ 0.49
LPCAT4Q643R3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 RBM17P2-201ENST00000616397 1405 ntBASIC18.13■□□□□ 0.49
LPCAT4Q643R3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LPCAT4Q643R3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 HCG11-201ENST00000411553 5696 ntBASIC18.12■□□□□ 0.49
LPCAT4Q643R3 TNRC18P3-201ENST00000441896 2691 ntBASIC18.12■□□□□ 0.49
LPCAT4Q643R3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 MIR572-201ENST00000384983 95 ntBASIC18.12■□□□□ 0.49
LPCAT4Q643R3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 LINC00896-202ENST00000609602 2128 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms