Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 HES6-204ENST00000409182 863 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 AC092028.1-203ENST00000608262 953 ntBASIC9.68□□□□□ -0.86
LINC01554Q52M75 AC010997.5-201ENST00000609182 354 ntBASIC9.68□□□□□ -0.86
LINC01554Q52M75 AC005052.1-201ENST00000625181 2492 ntBASIC9.68□□□□□ -0.86
LINC01554Q52M75 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
LINC01554Q52M75 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01554Q52M75 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC9.67□□□□□ -0.86
LINC01554Q52M75 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PCDHA12-202ENST00000613593 2588 ntBASIC9.67□□□□□ -0.86
LINC01554Q52M75 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 TFPT-201ENST00000391757 774 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 CLTA-206ENST00000466396 695 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 AC104564.3-201ENST00000582367 638 ntBASIC9.67□□□□□ -0.86
LINC01554Q52M75 MIR4787-201ENST00000607364 84 ntBASIC9.67□□□□□ -0.86
LINC01554Q52M75 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 LINC00554-201ENST00000564841 3011 ntBASIC9.67□□□□□ -0.86
LINC01554Q52M75 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 AC125437.2-201ENST00000625180 2167 ntBASIC9.67□□□□□ -0.86
LINC01554Q52M75 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01554Q52M75 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01554Q52M75 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01554Q52M75 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01554Q52M75 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01554Q52M75 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC01554Q52M75 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC01554Q52M75 FEM1AP4-201ENST00000443167 1987 ntBASIC9.66□□□□□ -0.86
LINC01554Q52M75 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01554Q52M75 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01554Q52M75 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01554Q52M75 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01554Q52M75 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01554Q52M75 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LINC01554Q52M75 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01554Q52M75 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms