Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
USH1GQ495M9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
USH1GQ495M9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
USH1GQ495M9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.14■■□□□ 1.13
USH1GQ495M9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
USH1GQ495M9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
USH1GQ495M9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
USH1GQ495M9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
USH1GQ495M9 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.14■■□□□ 1.13
USH1GQ495M9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.14■■□□□ 1.13
USH1GQ495M9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
USH1GQ495M9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.14■■□□□ 1.13
USH1GQ495M9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
USH1GQ495M9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.14■■□□□ 1.13
USH1GQ495M9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
USH1GQ495M9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
USH1GQ495M9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
USH1GQ495M9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.13■■□□□ 1.13
USH1GQ495M9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.13■■□□□ 1.13
USH1GQ495M9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
USH1GQ495M9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.13■■□□□ 1.13
USH1GQ495M9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
USH1GQ495M9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
USH1GQ495M9 TERF1P1-201ENST00000311003 1181 ntBASIC22.13■■□□□ 1.13
USH1GQ495M9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
USH1GQ495M9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.13■■□□□ 1.13
USH1GQ495M9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
USH1GQ495M9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
USH1GQ495M9 AC010331.1-201ENST00000611423 582 ntBASIC22.13■■□□□ 1.13
USH1GQ495M9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.13■■□□□ 1.13
USH1GQ495M9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
USH1GQ495M9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
USH1GQ495M9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.13■■□□□ 1.13
USH1GQ495M9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
USH1GQ495M9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
USH1GQ495M9 SDHAP1-207ENST00000440850 2000 ntBASIC22.13■■□□□ 1.13
USH1GQ495M9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
USH1GQ495M9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 AL137013.1-201ENST00000432946 1228 ntBASIC22.12■■□□□ 1.13
USH1GQ495M9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
USH1GQ495M9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
USH1GQ495M9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.12■■□□□ 1.13
USH1GQ495M9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
USH1GQ495M9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.12■■□□□ 1.13
USH1GQ495M9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.12■■□□□ 1.13
USH1GQ495M9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
USH1GQ495M9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.11■■□□□ 1.13
USH1GQ495M9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.11■■□□□ 1.13
USH1GQ495M9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.11■■□□□ 1.13
USH1GQ495M9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.11■■□□□ 1.13
USH1GQ495M9 AC010203.1-204ENST00000548782 407 ntBASIC22.11■■□□□ 1.13
USH1GQ495M9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.11■■□□□ 1.13
USH1GQ495M9 AC092865.7-201ENST00000641832 219 ntBASIC22.11■■□□□ 1.13
USH1GQ495M9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.11■■□□□ 1.13
USH1GQ495M9 KRT8P11-201ENST00000409686 1436 ntBASIC22.11■■□□□ 1.13
USH1GQ495M9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
USH1GQ495M9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.11■■□□□ 1.13
USH1GQ495M9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
USH1GQ495M9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.1■■□□□ 1.13
USH1GQ495M9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.1■■□□□ 1.13
USH1GQ495M9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
USH1GQ495M9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
USH1GQ495M9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 AC128688.1-201ENST00000487626 519 ntBASIC22.1■■□□□ 1.13
USH1GQ495M9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.1■■□□□ 1.13
USH1GQ495M9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.1■■□□□ 1.13
USH1GQ495M9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.1■■□□□ 1.13
USH1GQ495M9 FAM87A-204ENST00000613235 858 ntBASIC22.1■■□□□ 1.13
USH1GQ495M9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
USH1GQ495M9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.09■■□□□ 1.13
USH1GQ495M9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
USH1GQ495M9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.09■■□□□ 1.13
USH1GQ495M9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms