Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCGF3Q3KNV8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF3Q3KNV8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF3Q3KNV8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF3Q3KNV8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.05■□□□□ 0.32
PCGF3Q3KNV8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF3Q3KNV8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF3Q3KNV8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCGF3Q3KNV8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 AC120498.8-201ENST00000614275 531 ntBASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 KRT8P20-201ENST00000423953 1409 ntBASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF3Q3KNV8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 PRORSD1P-201ENST00000295112 541 ntBASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 AL031963.3-201ENST00000606441 850 ntBASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 AC006557.6-201ENST00000623071 864 ntBASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
PCGF3Q3KNV8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 AC005082.1-201ENST00000413042 2259 ntBASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF3Q3KNV8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms