Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 LINC01465-201ENST00000408887 1940 ntBASIC16.43■□□□□ 0.22
EFNB3Q15768 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
EFNB3Q15768 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.43■□□□□ 0.22
EFNB3Q15768 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
EFNB3Q15768 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.43■□□□□ 0.22
EFNB3Q15768 CCR12P-201ENST00000446203 998 ntBASIC16.43■□□□□ 0.22
EFNB3Q15768 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
EFNB3Q15768 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
EFNB3Q15768 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.43■□□□□ 0.22
EFNB3Q15768 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.42■□□□□ 0.22
EFNB3Q15768 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
EFNB3Q15768 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.42■□□□□ 0.22
EFNB3Q15768 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
EFNB3Q15768 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
EFNB3Q15768 CA15P1-201ENST00000481698 905 ntBASIC16.42■□□□□ 0.22
EFNB3Q15768 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.42■□□□□ 0.22
EFNB3Q15768 AC116562.4-202ENST00000641738 218 ntBASIC16.42■□□□□ 0.22
EFNB3Q15768 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
EFNB3Q15768 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.42■□□□□ 0.22
EFNB3Q15768 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
EFNB3Q15768 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.42■□□□□ 0.22
EFNB3Q15768 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
EFNB3Q15768 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.42■□□□□ 0.22
EFNB3Q15768 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
EFNB3Q15768 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFNB3Q15768 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.41■□□□□ 0.22
EFNB3Q15768 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.41■□□□□ 0.22
EFNB3Q15768 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.41■□□□□ 0.22
EFNB3Q15768 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 AC005521.1-201ENST00000393351 872 ntBASIC16.41■□□□□ 0.22
EFNB3Q15768 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.41■□□□□ 0.22
EFNB3Q15768 TMPOP1-202ENST00000424642 1267 ntBASIC16.41■□□□□ 0.22
EFNB3Q15768 AL137013.1-201ENST00000432946 1228 ntBASIC16.41■□□□□ 0.22
EFNB3Q15768 PRSS44-201ENST00000515154 1146 ntBASIC16.41■□□□□ 0.22
EFNB3Q15768 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
EFNB3Q15768 CKBP1-201ENST00000565489 1086 ntBASIC16.41■□□□□ 0.22
EFNB3Q15768 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.41■□□□□ 0.22
EFNB3Q15768 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.41■□□□□ 0.22
EFNB3Q15768 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.41■□□□□ 0.22
EFNB3Q15768 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFNB3Q15768 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.4■□□□□ 0.22
EFNB3Q15768 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB3Q15768 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB3Q15768 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 ZNF815P-204ENST00000434898 1737 ntBASIC16.4■□□□□ 0.22
EFNB3Q15768 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB3Q15768 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.4■□□□□ 0.22
EFNB3Q15768 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 TERF1P1-201ENST00000311003 1181 ntBASIC16.4■□□□□ 0.22
EFNB3Q15768 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.4■□□□□ 0.22
EFNB3Q15768 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
EFNB3Q15768 MIR1224-201ENST00000408193 85 ntBASIC16.4■□□□□ 0.22
EFNB3Q15768 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms