Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.54■□□□□ 0.56
RPL38P63173 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.54■□□□□ 0.56
RPL38P63173 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.54■□□□□ 0.56
RPL38P63173 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.54■□□□□ 0.56
RPL38P63173 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.54■□□□□ 0.56
RPL38P63173 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.54■□□□□ 0.56
RPL38P63173 AC083880.1-201ENST00000608266 535 ntBASIC18.54■□□□□ 0.56
RPL38P63173 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 CROCCP3-202ENST00000420820 1947 ntBASIC18.54■□□□□ 0.56
RPL38P63173 AC006333.2-201ENST00000607957 2099 ntBASIC18.54■□□□□ 0.56
RPL38P63173 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.54■□□□□ 0.56
RPL38P63173 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.54■□□□□ 0.56
RPL38P63173 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
RPL38P63173 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPL38P63173 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.54■□□□□ 0.56
RPL38P63173 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RPL38P63173 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RPL38P63173 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RPL38P63173 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.53■□□□□ 0.56
RPL38P63173 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RPL38P63173 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RPL38P63173 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.53■□□□□ 0.56
RPL38P63173 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.53■□□□□ 0.56
RPL38P63173 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.53■□□□□ 0.56
RPL38P63173 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RPL38P63173 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 SOX15-203ENST00000570788 1093 ntBASIC18.53■□□□□ 0.56
RPL38P63173 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.53■□□□□ 0.56
RPL38P63173 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.53■□□□□ 0.56
RPL38P63173 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RPL38P63173 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPL38P63173 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.53■□□□□ 0.56
RPL38P63173 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.53■□□□□ 0.56
RPL38P63173 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPL38P63173 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPL38P63173 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.52■□□□□ 0.56
RPL38P63173 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.52■□□□□ 0.56
RPL38P63173 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.52■□□□□ 0.56
RPL38P63173 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPL38P63173 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPL38P63173 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPL38P63173 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.52■□□□□ 0.56
RPL38P63173 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.52■□□□□ 0.56
RPL38P63173 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.52■□□□□ 0.56
RPL38P63173 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPL38P63173 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
RPL38P63173 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPL38P63173 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPL38P63173 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPL38P63173 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPL38P63173 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RPL38P63173 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RPL38P63173 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.51■□□□□ 0.55
RPL38P63173 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.51■□□□□ 0.55
RPL38P63173 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPL38P63173 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPL38P63173 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.51■□□□□ 0.55
RPL38P63173 AC120498.8-201ENST00000614275 531 ntBASIC18.51■□□□□ 0.55
RPL38P63173 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.51■□□□□ 0.55
RPL38P63173 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.51■□□□□ 0.55
RPL38P63173 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPL38P63173 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms