Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.46□□□□□ -0.25
CKS1BP61024 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.46□□□□□ -0.25
CKS1BP61024 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.46□□□□□ -0.25
CKS1BP61024 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CKS1BP61024 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.46□□□□□ -0.25
CKS1BP61024 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.46□□□□□ -0.25
CKS1BP61024 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.46□□□□□ -0.25
CKS1BP61024 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.46□□□□□ -0.25
CKS1BP61024 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CKS1BP61024 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CKS1BP61024 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CKS1BP61024 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CKS1BP61024 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CKS1BP61024 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.46□□□□□ -0.26
CKS1BP61024 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CKS1BP61024 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CKS1BP61024 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CKS1BP61024 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
CKS1BP61024 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.45□□□□□ -0.26
CKS1BP61024 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.45□□□□□ -0.26
CKS1BP61024 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 DPP3P2-201ENST00000416030 1696 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.45□□□□□ -0.26
CKS1BP61024 DUX4L2-201ENST00000561772 1275 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 FAM21FP-204ENST00000608637 956 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
CKS1BP61024 DUX4L6-201ENST00000626483 1275 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 DUX4L1-201ENST00000627662 1275 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 DUX4L8-201ENST00000629013 1275 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 DUX4L3-201ENST00000630187 1275 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 DUX4L7-201ENST00000630678 1275 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 DUX4L5-201ENST00000630834 1275 ntBASIC13.45□□□□□ -0.26
CKS1BP61024 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.45□□□□□ -0.26
CKS1BP61024 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS1BP61024 AL162727.3-201ENST00000635661 2787 ntBASIC13.44□□□□□ -0.26
CKS1BP61024 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.44□□□□□ -0.26
CKS1BP61024 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.44□□□□□ -0.26
CKS1BP61024 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS1BP61024 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CKS1BP61024 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.44□□□□□ -0.26
CKS1BP61024 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CKS1BP61024 AC010141.2-201ENST00000452426 721 ntBASIC13.44□□□□□ -0.26
CKS1BP61024 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS1BP61024 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CKS1BP61024 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms