Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.81■□□□□ 0.44
PER3P56645 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.81■□□□□ 0.44
PER3P56645 NTF6B-201ENST00000591913 560 ntBASIC17.81■□□□□ 0.44
PER3P56645 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.81■□□□□ 0.44
PER3P56645 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PER3P56645 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PER3P56645 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PER3P56645 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PER3P56645 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PER3P56645 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.81■□□□□ 0.44
PER3P56645 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PER3P56645 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PER3P56645 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PER3P56645 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PER3P56645 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PER3P56645 KRT8P20-201ENST00000423953 1409 ntBASIC17.81■□□□□ 0.44
PER3P56645 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PER3P56645 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
PER3P56645 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.8■□□□□ 0.44
PER3P56645 AC006128.1-201ENST00000624704 1661 ntBASIC17.8■□□□□ 0.44
PER3P56645 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PER3P56645 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PER3P56645 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.8■□□□□ 0.44
PER3P56645 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
PER3P56645 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.8■□□□□ 0.44
PER3P56645 LINC01238-205ENST00000567549 1107 ntBASIC17.8■□□□□ 0.44
PER3P56645 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.8■□□□□ 0.44
PER3P56645 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PER3P56645 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.8■□□□□ 0.44
PER3P56645 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
PER3P56645 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.8■□□□□ 0.44
PER3P56645 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PER3P56645 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
PER3P56645 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.79■□□□□ 0.44
PER3P56645 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.79■□□□□ 0.44
PER3P56645 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.79■□□□□ 0.44
PER3P56645 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.79■□□□□ 0.44
PER3P56645 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.79■□□□□ 0.44
PER3P56645 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.79■□□□□ 0.44
PER3P56645 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PER3P56645 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PER3P56645 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.79■□□□□ 0.44
PER3P56645 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 KRT16P1-201ENST00000399124 1418 ntBASIC17.79■□□□□ 0.44
PER3P56645 AC124283.5-201ENST00000624661 1809 ntBASIC17.79■□□□□ 0.44
PER3P56645 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PER3P56645 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PER3P56645 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
PER3P56645 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PER3P56645 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.78■□□□□ 0.44
PER3P56645 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PER3P56645 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.78■□□□□ 0.44
PER3P56645 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.78■□□□□ 0.44
PER3P56645 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
PER3P56645 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.78■□□□□ 0.44
PER3P56645 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 C2orf69P3-201ENST00000565542 1120 ntBASIC17.78■□□□□ 0.44
PER3P56645 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.78■□□□□ 0.44
PER3P56645 CR392000.1-201ENST00000624770 1228 ntBASIC17.78■□□□□ 0.44
PER3P56645 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms