Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH11P55287 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH11P55287 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CDH11P55287 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDH11P55287 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH11P55287 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH11P55287 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDH11P55287 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH11P55287 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH11P55287 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CDH11P55287 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH11P55287 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CDH11P55287 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 PNMA6B-201ENST00000538162 1200 ntBASIC17.62■□□□□ 0.41
CDH11P55287 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDH11P55287 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH11P55287 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH11P55287 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH11P55287 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
CDH11P55287 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDH11P55287 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH11P55287 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.61■□□□□ 0.41
CDH11P55287 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDH11P55287 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH11P55287 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH11P55287 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH11P55287 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH11P55287 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDH11P55287 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDH11P55287 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDH11P55287 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.6■□□□□ 0.41
CDH11P55287 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 AC098590.1-201ENST00000468126 897 ntBASIC17.6■□□□□ 0.41
CDH11P55287 AC093827.2-201ENST00000512654 315 ntBASIC17.6■□□□□ 0.41
CDH11P55287 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.6■□□□□ 0.41
CDH11P55287 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH11P55287 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDH11P55287 AC073648.6-201ENST00000641589 218 ntBASIC17.6■□□□□ 0.41
CDH11P55287 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH11P55287 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDH11P55287 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH11P55287 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDH11P55287 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CDH11P55287 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH11P55287 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CDH11P55287 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDH11P55287 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CDH11P55287 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CDH11P55287 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH11P55287 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDH11P55287 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms