Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H2P55055 MKRN4P-201ENST00000444706 1521 ntBASIC18.22■□□□□ 0.51
NR1H2P55055 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.22■□□□□ 0.51
NR1H2P55055 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H2P55055 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H2P55055 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H2P55055 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H2P55055 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.22■□□□□ 0.51
NR1H2P55055 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.22■□□□□ 0.51
NR1H2P55055 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NR1H2P55055 PRORSD1P-202ENST00000563365 2154 ntBASIC18.21■□□□□ 0.51
NR1H2P55055 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
NR1H2P55055 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NR1H2P55055 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NR1H2P55055 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.21■□□□□ 0.51
NR1H2P55055 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.21■□□□□ 0.51
NR1H2P55055 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 AL512625.2-201ENST00000417533 625 ntBASIC18.21■□□□□ 0.51
NR1H2P55055 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.21■□□□□ 0.51
NR1H2P55055 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.21■□□□□ 0.51
NR1H2P55055 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NR1H2P55055 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.21■□□□□ 0.51
NR1H2P55055 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.21■□□□□ 0.51
NR1H2P55055 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.21■□□□□ 0.51
NR1H2P55055 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NR1H2P55055 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H2P55055 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NR1H2P55055 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.2■□□□□ 0.5
NR1H2P55055 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NR1H2P55055 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NR1H2P55055 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.2■□□□□ 0.5
NR1H2P55055 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NR1H2P55055 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.2■□□□□ 0.5
NR1H2P55055 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NR1H2P55055 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NR1H2P55055 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NR1H2P55055 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.2■□□□□ 0.5
NR1H2P55055 AC243732.1-201ENST00000612648 864 ntBASIC18.2■□□□□ 0.5
NR1H2P55055 MIR2861-201ENST00000636310 90 ntBASIC18.2■□□□□ 0.5
NR1H2P55055 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.2■□□□□ 0.5
NR1H2P55055 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NR1H2P55055 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NR1H2P55055 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NR1H2P55055 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NR1H2P55055 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NR1H2P55055 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR1H2P55055 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.19■□□□□ 0.5
NR1H2P55055 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 AC139713.2-201ENST00000641328 2723 ntBASIC18.19■□□□□ 0.5
NR1H2P55055 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NR1H2P55055 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H2P55055 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H2P55055 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H2P55055 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.19■□□□□ 0.5
NR1H2P55055 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.19■□□□□ 0.5
NR1H2P55055 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.19■□□□□ 0.5
NR1H2P55055 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H2P55055 AL591742.1-201ENST00000604433 565 ntBASIC18.19■□□□□ 0.5
NR1H2P55055 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NR1H2P55055 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NR1H2P55055 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H2P55055 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms