Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.43■□□□□ 0.7
LIMK2P53671 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LIMK2P53671 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.43■□□□□ 0.7
LIMK2P53671 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.42■□□□□ 0.7
LIMK2P53671 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.42■□□□□ 0.7
LIMK2P53671 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.42■□□□□ 0.7
LIMK2P53671 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.42■□□□□ 0.7
LIMK2P53671 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 TEX21P-204ENST00000641479 1693 ntBASIC19.42■□□□□ 0.7
LIMK2P53671 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LIMK2P53671 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIMK2P53671 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.41■□□□□ 0.7
LIMK2P53671 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.41■□□□□ 0.7
LIMK2P53671 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
LIMK2P53671 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 AC012618.2-201ENST00000428058 849 ntBASIC19.41■□□□□ 0.7
LIMK2P53671 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.41■□□□□ 0.7
LIMK2P53671 SNORA78-201ENST00000459373 127 ntBASIC19.41■□□□□ 0.7
LIMK2P53671 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.41■□□□□ 0.7
LIMK2P53671 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
LIMK2P53671 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.41■□□□□ 0.7
LIMK2P53671 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.41■□□□□ 0.7
LIMK2P53671 AC110285.5-201ENST00000611501 352 ntBASIC19.41■□□□□ 0.7
LIMK2P53671 ZNF815P-204ENST00000434898 1737 ntBASIC19.41■□□□□ 0.7
LIMK2P53671 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LIMK2P53671 AC141586.3-201ENST00000562166 1838 ntBASIC19.41■□□□□ 0.7
LIMK2P53671 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.41■□□□□ 0.7
LIMK2P53671 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LIMK2P53671 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LIMK2P53671 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
LIMK2P53671 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LIMK2P53671 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIMK2P53671 AL161938.1-201ENST00000569833 2180 ntBASIC19.4■□□□□ 0.7
LIMK2P53671 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.4■□□□□ 0.7
LIMK2P53671 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.4■□□□□ 0.7
LIMK2P53671 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIMK2P53671 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIMK2P53671 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIMK2P53671 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.4■□□□□ 0.7
LIMK2P53671 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.4■□□□□ 0.7
LIMK2P53671 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LIMK2P53671 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.4■□□□□ 0.7
LIMK2P53671 AC233702.5-201ENST00000584107 538 ntBASIC19.4■□□□□ 0.7
LIMK2P53671 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.4■□□□□ 0.7
LIMK2P53671 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LIMK2P53671 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LIMK2P53671 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIMK2P53671 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIMK2P53671 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.4■□□□□ 0.7
LIMK2P53671 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.4■□□□□ 0.7
LIMK2P53671 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
LIMK2P53671 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.39■□□□□ 0.7
LIMK2P53671 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LIMK2P53671 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LIMK2P53671 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
LIMK2P53671 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 RPS2P55-201ENST00000397318 883 ntBASIC19.39■□□□□ 0.69
LIMK2P53671 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 KRASP1-201ENST00000407852 552 ntBASIC19.39■□□□□ 0.69
LIMK2P53671 AC107956.1-201ENST00000494359 873 ntBASIC19.39■□□□□ 0.69
LIMK2P53671 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.39■□□□□ 0.69
LIMK2P53671 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.39■□□□□ 0.69
LIMK2P53671 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LIMK2P53671 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LIMK2P53671 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK2P53671 AC124283.5-201ENST00000624661 1809 ntBASIC19.39■□□□□ 0.69
LIMK2P53671 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.39■□□□□ 0.69
LIMK2P53671 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms