Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.42■□□□□ 0.54
POLR2JP52435 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.42■□□□□ 0.54
POLR2JP52435 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
POLR2JP52435 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
POLR2JP52435 AL162430.1-201ENST00000480705 870 ntBASIC18.42■□□□□ 0.54
POLR2JP52435 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.42■□□□□ 0.54
POLR2JP52435 AF201337.1-201ENST00000520239 748 ntBASIC18.42■□□□□ 0.54
POLR2JP52435 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.42■□□□□ 0.54
POLR2JP52435 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.42■□□□□ 0.54
POLR2JP52435 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.42■□□□□ 0.54
POLR2JP52435 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
POLR2JP52435 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.42■□□□□ 0.54
POLR2JP52435 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
POLR2JP52435 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 WIZP1-201ENST00000531444 2299 ntBASIC18.42■□□□□ 0.54
POLR2JP52435 IRX1P1-201ENST00000438849 1838 ntBASIC18.42■□□□□ 0.54
POLR2JP52435 AC124283.5-201ENST00000624661 1809 ntBASIC18.42■□□□□ 0.54
POLR2JP52435 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.42■□□□□ 0.54
POLR2JP52435 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2JP52435 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2JP52435 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
POLR2JP52435 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2JP52435 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
POLR2JP52435 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR2JP52435 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2JP52435 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.41■□□□□ 0.54
POLR2JP52435 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2JP52435 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2JP52435 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
POLR2JP52435 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2JP52435 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2JP52435 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2JP52435 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2JP52435 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
POLR2JP52435 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.4■□□□□ 0.54
POLR2JP52435 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2JP52435 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.4■□□□□ 0.54
POLR2JP52435 RPS2P52-201ENST00000469610 820 ntBASIC18.4■□□□□ 0.54
POLR2JP52435 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.4■□□□□ 0.54
POLR2JP52435 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2JP52435 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.4■□□□□ 0.54
POLR2JP52435 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2JP52435 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.4■□□□□ 0.54
POLR2JP52435 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 AC006557.6-201ENST00000623071 864 ntBASIC18.4■□□□□ 0.54
POLR2JP52435 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.4■□□□□ 0.54
POLR2JP52435 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
POLR2JP52435 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2JP52435 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2JP52435 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
POLR2JP52435 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2JP52435 KRT8P8-201ENST00000434750 1448 ntBASIC18.4■□□□□ 0.54
POLR2JP52435 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2JP52435 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR2JP52435 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
POLR2JP52435 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms