Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB28P51157 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB28P51157 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB28P51157 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB28P51157 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB28P51157 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB28P51157 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB28P51157 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RAB28P51157 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAB28P51157 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB28P51157 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB28P51157 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RAB28P51157 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB28P51157 SLC25A24-204ENST00000569674 2357 ntBASIC18.62■□□□□ 0.57
RAB28P51157 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB28P51157 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB28P51157 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB28P51157 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.62■□□□□ 0.57
RAB28P51157 AC091390.4-202ENST00000476426 537 ntBASIC18.62■□□□□ 0.57
RAB28P51157 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB28P51157 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
RAB28P51157 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.62■□□□□ 0.57
RAB28P51157 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB28P51157 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.62■□□□□ 0.57
RAB28P51157 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB28P51157 AL355075.4-201ENST00000554988 638 ntBASIC18.62■□□□□ 0.57
RAB28P51157 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB28P51157 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB28P51157 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB28P51157 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB28P51157 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB28P51157 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB28P51157 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RAB28P51157 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB28P51157 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB28P51157 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB28P51157 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB28P51157 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB28P51157 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RAB28P51157 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB28P51157 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RAB28P51157 AC093484.2-201ENST00000580996 2166 ntBASIC18.61■□□□□ 0.57
RAB28P51157 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB28P51157 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB28P51157 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB28P51157 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB28P51157 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 UNC93B2-201ENST00000285383 730 ntBASIC18.61■□□□□ 0.57
RAB28P51157 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 FAM207BP-201ENST00000447172 505 ntBASIC18.61■□□□□ 0.57
RAB28P51157 RBM17P1-201ENST00000453646 1190 ntBASIC18.61■□□□□ 0.57
RAB28P51157 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RAB28P51157 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
RAB28P51157 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB28P51157 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB28P51157 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB28P51157 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB28P51157 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RAB28P51157 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAB28P51157 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RAB28P51157 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RAB28P51157 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
RAB28P51157 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB28P51157 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB28P51157 AP000692.2-201ENST00000608391 879 ntBASIC18.6■□□□□ 0.57
RAB28P51157 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB28P51157 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB28P51157 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RAB28P51157 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB28P51157 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RAB28P51157 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAB28P51157 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB28P51157 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RAB28P51157 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAB28P51157 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB28P51157 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB28P51157 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB28P51157 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.59■□□□□ 0.57
RAB28P51157 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms