Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF144AP50876 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF144AP50876 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF144AP50876 YBX1P10-201ENST00000444752 975 ntBASIC17.89■□□□□ 0.45
RNF144AP50876 AC128676.1-201ENST00000454392 318 ntBASIC17.89■□□□□ 0.45
RNF144AP50876 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF144AP50876 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF144AP50876 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF144AP50876 PRKY-204ENST00000533551 1019 ntBASIC17.89■□□□□ 0.45
RNF144AP50876 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF144AP50876 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 NBPF21P-201ENST00000425093 1451 ntBASIC17.88■□□□□ 0.45
RNF144AP50876 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF144AP50876 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF144AP50876 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
RNF144AP50876 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF144AP50876 SDHAP1-207ENST00000440850 2000 ntBASIC17.88■□□□□ 0.45
RNF144AP50876 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF144AP50876 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF144AP50876 POU5F1P3-201ENST00000428824 1078 ntBASIC17.88■□□□□ 0.45
RNF144AP50876 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF144AP50876 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF144AP50876 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF144AP50876 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF144AP50876 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
RNF144AP50876 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RNF144AP50876 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF144AP50876 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF144AP50876 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF144AP50876 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF144AP50876 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF144AP50876 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF144AP50876 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF144AP50876 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF144AP50876 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
RNF144AP50876 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF144AP50876 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RNF144AP50876 AC239809.2-201ENST00000415381 517 ntBASIC17.87■□□□□ 0.45
RNF144AP50876 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF144AP50876 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF144AP50876 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF144AP50876 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF144AP50876 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF144AP50876 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RNF144AP50876 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RNF144AP50876 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
RNF144AP50876 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF144AP50876 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
RNF144AP50876 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF144AP50876 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF144AP50876 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNF144AP50876 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF144AP50876 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF144AP50876 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF144AP50876 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms