Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.92■□□□□ 0.3
CX3CR1P49238 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CX3CR1P49238 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.92■□□□□ 0.3
CX3CR1P49238 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.92■□□□□ 0.3
CX3CR1P49238 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CX3CR1P49238 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.92■□□□□ 0.3
CX3CR1P49238 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CX3CR1P49238 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CX3CR1P49238 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.92■□□□□ 0.3
CX3CR1P49238 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CX3CR1P49238 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
CX3CR1P49238 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.92■□□□□ 0.3
CX3CR1P49238 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CR1P49238 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CX3CR1P49238 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CX3CR1P49238 AC090340.1-201ENST00000620778 4980 ntBASIC16.91■□□□□ 0.3
CX3CR1P49238 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.91■□□□□ 0.3
CX3CR1P49238 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CX3CR1P49238 TEX21P-204ENST00000641479 1693 ntBASIC16.91■□□□□ 0.3
CX3CR1P49238 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.91■□□□□ 0.3
CX3CR1P49238 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CX3CR1P49238 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CX3CR1P49238 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.91■□□□□ 0.3
CX3CR1P49238 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.91■□□□□ 0.3
CX3CR1P49238 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.91■□□□□ 0.3
CX3CR1P49238 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CX3CR1P49238 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.91■□□□□ 0.3
CX3CR1P49238 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.91■□□□□ 0.3
CX3CR1P49238 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.91■□□□□ 0.3
CX3CR1P49238 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.91■□□□□ 0.3
CX3CR1P49238 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.91■□□□□ 0.3
CX3CR1P49238 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.91■□□□□ 0.3
CX3CR1P49238 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CR1P49238 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CX3CR1P49238 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CX3CR1P49238 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.9■□□□□ 0.3
CX3CR1P49238 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.9■□□□□ 0.3
CX3CR1P49238 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CX3CR1P49238 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CX3CR1P49238 HLA-L-209ENST00000420110 1011 ntBASIC16.9■□□□□ 0.3
CX3CR1P49238 TUBB8P6-201ENST00000436895 1288 ntBASIC16.9■□□□□ 0.3
CX3CR1P49238 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.9■□□□□ 0.3
CX3CR1P49238 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.9■□□□□ 0.3
CX3CR1P49238 UNC93B4-201ENST00000505679 747 ntBASIC16.9■□□□□ 0.3
CX3CR1P49238 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.9■□□□□ 0.3
CX3CR1P49238 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.9■□□□□ 0.3
CX3CR1P49238 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CX3CR1P49238 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.9■□□□□ 0.3
CX3CR1P49238 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CX3CR1P49238 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CX3CR1P49238 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CR1P49238 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.89■□□□□ 0.3
CX3CR1P49238 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CX3CR1P49238 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CR1P49238 AC141586.3-201ENST00000562166 1838 ntBASIC16.89■□□□□ 0.29
CX3CR1P49238 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms