Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MCRIP2P1-201ENST00000394346 511 ntBASIC15.84■□□□□ 0.13
SNCAP37840 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCAP37840 AC007322.4-201ENST00000509611 723 ntBASIC15.84■□□□□ 0.13
SNCAP37840 AC137761.2-201ENST00000561729 223 ntBASIC15.84■□□□□ 0.13
SNCAP37840 AC145350.3-201ENST00000569033 163 ntBASIC15.84■□□□□ 0.13
SNCAP37840 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCAP37840 KRT18P61-201ENST00000585825 1298 ntBASIC15.84■□□□□ 0.13
SNCAP37840 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCAP37840 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
SNCAP37840 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCAP37840 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCAP37840 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
SNCAP37840 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNCAP37840 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNCAP37840 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.84■□□□□ 0.13
SNCAP37840 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SNCAP37840 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNCAP37840 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SNCAP37840 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNCAP37840 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
SNCAP37840 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNCAP37840 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.83■□□□□ 0.13
SNCAP37840 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SNCAP37840 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNCAP37840 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNCAP37840 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCAP37840 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.83■□□□□ 0.12
SNCAP37840 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCAP37840 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCAP37840 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCAP37840 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SNCAP37840 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.83■□□□□ 0.12
SNCAP37840 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.83■□□□□ 0.12
SNCAP37840 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCAP37840 KRT8P20-201ENST00000423953 1409 ntBASIC15.83■□□□□ 0.12
SNCAP37840 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
SNCAP37840 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCAP37840 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNCAP37840 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SNCAP37840 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.82■□□□□ 0.12
SNCAP37840 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCAP37840 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNCAP37840 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCAP37840 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNCAP37840 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SNCAP37840 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.82■□□□□ 0.12
SNCAP37840 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SNCAP37840 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.82■□□□□ 0.12
SNCAP37840 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
SNCAP37840 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SNCAP37840 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SNCAP37840 HLA-G-202ENST00000376815 851 ntBASIC15.82■□□□□ 0.12
SNCAP37840 HLA-G-203ENST00000376818 1127 ntBASIC15.82■□□□□ 0.12
SNCAP37840 AC016769.1-201ENST00000409132 1010 ntBASIC15.82■□□□□ 0.12
SNCAP37840 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNCAP37840 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.82■□□□□ 0.12
SNCAP37840 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
SNCAP37840 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.82■□□□□ 0.12
SNCAP37840 AC016405.3-201ENST00000607710 860 ntBASIC15.82■□□□□ 0.12
SNCAP37840 AC100791.3-201ENST00000617619 330 ntBASIC15.82■□□□□ 0.12
SNCAP37840 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCAP37840 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SNCAP37840 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.82■□□□□ 0.12
SNCAP37840 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SNCAP37840 AC009237.14-201ENST00000609975 1594 ntBASIC15.82■□□□□ 0.12
SNCAP37840 AC068880.1-201ENST00000507289 2297 ntBASIC15.82■□□□□ 0.12
SNCAP37840 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCAP37840 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNCAP37840 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.81■□□□□ 0.12
SNCAP37840 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SNCAP37840 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNCAP37840 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.81■□□□□ 0.12
SNCAP37840 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.81■□□□□ 0.12
SNCAP37840 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.81■□□□□ 0.12
SNCAP37840 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.81■□□□□ 0.12
SNCAP37840 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNCAP37840 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.81■□□□□ 0.12
SNCAP37840 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNCAP37840 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNCAP37840 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.81■□□□□ 0.12
SNCAP37840 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNCAP37840 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.81■□□□□ 0.12
SNCAP37840 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.81■□□□□ 0.12
SNCAP37840 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.81■□□□□ 0.12
SNCAP37840 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNCAP37840 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SNCAP37840 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms