Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CHMP24386 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18■□□□□ 0.47
CHMP24386 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CHMP24386 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHMP24386 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CHMP24386 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CHMP24386 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.99■□□□□ 0.47
CHMP24386 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.99■□□□□ 0.47
CHMP24386 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.99■□□□□ 0.47
CHMP24386 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CHMP24386 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.99■□□□□ 0.47
CHMP24386 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP24386 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP24386 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP24386 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP24386 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP24386 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHMP24386 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP24386 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CHMP24386 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP24386 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP24386 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP24386 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.98■□□□□ 0.47
CHMP24386 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP24386 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP24386 AL158047.1-201ENST00000445918 881 ntBASIC17.98■□□□□ 0.47
CHMP24386 UBE2SP1-201ENST00000450587 669 ntBASIC17.98■□□□□ 0.47
CHMP24386 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.98■□□□□ 0.47
CHMP24386 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP24386 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP24386 RPPH1-201ENST00000516869 333 ntBASIC17.98■□□□□ 0.47
CHMP24386 C1QBPP2-201ENST00000528754 825 ntBASIC17.98■□□□□ 0.47
CHMP24386 PRKY-204ENST00000533551 1019 ntBASIC17.98■□□□□ 0.47
CHMP24386 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP24386 AL121906.2-201ENST00000621597 723 ntBASIC17.98■□□□□ 0.47
CHMP24386 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CHMP24386 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP24386 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CHMP24386 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.98■□□□□ 0.47
CHMP24386 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP24386 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.98■□□□□ 0.47
CHMP24386 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP24386 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.98■□□□□ 0.47
CHMP24386 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMP24386 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CHMP24386 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.97■□□□□ 0.47
CHMP24386 AL359736.2-201ENST00000621992 437 ntBASIC17.97■□□□□ 0.47
CHMP24386 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHMP24386 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 AL138781.2-201ENST00000617896 1843 ntBASIC17.97■□□□□ 0.47
CHMP24386 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CHMP24386 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHMP24386 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP24386 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHMP24386 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms