Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL1P22362 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.6■□□□□ 0.25
CCL1P22362 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL1P22362 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CCL1P22362 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.6■□□□□ 0.25
CCL1P22362 UNC93B5-201ENST00000530315 699 ntBASIC16.6■□□□□ 0.25
CCL1P22362 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL1P22362 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.6■□□□□ 0.25
CCL1P22362 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL1P22362 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCL1P22362 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCL1P22362 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL1P22362 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL1P22362 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL1P22362 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCL1P22362 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.59■□□□□ 0.25
CCL1P22362 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.59■□□□□ 0.25
CCL1P22362 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL1P22362 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL1P22362 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL1P22362 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL1P22362 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.59■□□□□ 0.25
CCL1P22362 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.59■□□□□ 0.25
CCL1P22362 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.59■□□□□ 0.25
CCL1P22362 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCL1P22362 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL1P22362 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CCL1P22362 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.59■□□□□ 0.25
CCL1P22362 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.58■□□□□ 0.25
CCL1P22362 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CCL1P22362 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CCL1P22362 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.58■□□□□ 0.25
CCL1P22362 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CCL1P22362 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.58■□□□□ 0.24
CCL1P22362 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.58■□□□□ 0.24
CCL1P22362 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.58■□□□□ 0.24
CCL1P22362 PRKY-204ENST00000533551 1019 ntBASIC16.58■□□□□ 0.24
CCL1P22362 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCL1P22362 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.58■□□□□ 0.24
CCL1P22362 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CCL1P22362 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCL1P22362 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CCL1P22362 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCL1P22362 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCL1P22362 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCL1P22362 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.58■□□□□ 0.24
CCL1P22362 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL1P22362 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.57■□□□□ 0.24
CCL1P22362 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL1P22362 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.57■□□□□ 0.24
CCL1P22362 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCL1P22362 TSPY21P-201ENST00000433481 731 ntBASIC16.57■□□□□ 0.24
CCL1P22362 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL1P22362 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.57■□□□□ 0.24
CCL1P22362 C1QL1P1-201ENST00000568105 661 ntBASIC16.57■□□□□ 0.24
CCL1P22362 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.57■□□□□ 0.24
CCL1P22362 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL1P22362 AL512353.2-201ENST00000448759 1962 ntBASIC16.57■□□□□ 0.24
CCL1P22362 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms