Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.33■□□□□ 0.69
KRT4P19013 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.33■□□□□ 0.69
KRT4P19013 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT4P19013 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT4P19013 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
KRT4P19013 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 AC011767.1-201ENST00000617410 1153 ntBASIC19.33■□□□□ 0.68
KRT4P19013 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT4P19013 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KRT4P19013 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT4P19013 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KRT4P19013 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KRT4P19013 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT4P19013 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT4P19013 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.32■□□□□ 0.68
KRT4P19013 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT4P19013 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 AL133373.2-201ENST00000623187 2828 ntBASIC19.32■□□□□ 0.68
KRT4P19013 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT4P19013 AL512353.2-201ENST00000448759 1962 ntBASIC19.32■□□□□ 0.68
KRT4P19013 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT4P19013 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT4P19013 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT4P19013 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
KRT4P19013 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 SDHAP1-207ENST00000440850 2000 ntBASIC19.31■□□□□ 0.68
KRT4P19013 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT4P19013 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.31■□□□□ 0.68
KRT4P19013 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.31■□□□□ 0.68
KRT4P19013 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.31■□□□□ 0.68
KRT4P19013 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT4P19013 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT4P19013 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
KRT4P19013 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT4P19013 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
KRT4P19013 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT4P19013 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT4P19013 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT4P19013 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT4P19013 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
KRT4P19013 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
KRT4P19013 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KRT4P19013 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT4P19013 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT4P19013 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT4P19013 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.3■□□□□ 0.68
KRT4P19013 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT4P19013 BID-214ENST00000617586 542 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT4P19013 OR10C1-204ENST00000622521 1039 ntBASIC19.3■□□□□ 0.68
KRT4P19013 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT4P19013 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT4P19013 IRX1P1-201ENST00000438849 1838 ntBASIC19.3■□□□□ 0.68
KRT4P19013 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT4P19013 BICD1-207ENST00000551848 1962 ntBASIC19.3■□□□□ 0.68
KRT4P19013 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT4P19013 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms