Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC130P13994 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC130P13994 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC130P13994 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC130P13994 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC130P13994 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC130P13994 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC130P13994 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC130P13994 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC130P13994 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC130P13994 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC130P13994 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC130P13994 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC130P13994 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC130P13994 BX088651.1-201ENST00000540551 451 ntBASIC20.42■□□□□ 0.86
CCDC130P13994 AC130371.2-201ENST00000619443 611 ntBASIC20.42■□□□□ 0.86
CCDC130P13994 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC130P13994 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC130P13994 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC130P13994 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC130P13994 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC130P13994 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC130P13994 AL390955.1-201ENST00000428694 934 ntBASIC20.41■□□□□ 0.86
CCDC130P13994 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.41■□□□□ 0.86
CCDC130P13994 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC130P13994 AC007952.6-201ENST00000573168 2673 ntBASIC20.41■□□□□ 0.86
CCDC130P13994 AC003957.1-201ENST00000625108 2673 ntBASIC20.41■□□□□ 0.86
CCDC130P13994 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC130P13994 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC130P13994 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC130P13994 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC130P13994 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC130P13994 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC130P13994 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC130P13994 UNC93B2-201ENST00000285383 730 ntBASIC20.4■□□□□ 0.86
CCDC130P13994 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC130P13994 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC130P13994 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC130P13994 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC130P13994 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC130P13994 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC130P13994 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC130P13994 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC130P13994 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC130P13994 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC130P13994 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC130P13994 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC130P13994 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC130P13994 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC130P13994 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC130P13994 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC130P13994 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC130P13994 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC130P13994 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
CCDC130P13994 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC130P13994 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC130P13994 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC130P13994 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC130P13994 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC130P13994 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC130P13994 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC130P13994 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC130P13994 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC130P13994 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC130P13994 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC130P13994 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC130P13994 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC130P13994 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC130P13994 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC130P13994 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC130P13994 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC130P13994 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC130P13994 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC130P13994 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC130P13994 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC130P13994 MIR1238-201ENST00000408483 83 ntBASIC20.38■□□□□ 0.85
CCDC130P13994 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC130P13994 FAM207BP-201ENST00000447172 505 ntBASIC20.38■□□□□ 0.85
CCDC130P13994 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC130P13994 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC130P13994 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC130P13994 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC130P13994 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC130P13994 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms