Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC107956.1-201ENST00000494359 873 ntBASIC16.8■□□□□ 0.28
CCL2P13500 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL2P13500 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.8■□□□□ 0.28
CCL2P13500 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.8■□□□□ 0.28
CCL2P13500 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL2P13500 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL2P13500 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.8■□□□□ 0.28
CCL2P13500 CR392000.1-201ENST00000624770 1228 ntBASIC16.8■□□□□ 0.28
CCL2P13500 AP006294.2-201ENST00000641667 209 ntBASIC16.8■□□□□ 0.28
CCL2P13500 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL2P13500 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCL2P13500 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL2P13500 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL2P13500 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL2P13500 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL2P13500 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL2P13500 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL2P13500 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL2P13500 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL2P13500 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL2P13500 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 AC104417.2-201ENST00000562989 1793 ntBASIC16.79■□□□□ 0.28
CCL2P13500 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCL2P13500 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCL2P13500 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL2P13500 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCL2P13500 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CCL2P13500 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL2P13500 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL2P13500 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL2P13500 NIFKP9-201ENST00000419265 221 ntBASIC16.79■□□□□ 0.28
CCL2P13500 FAM197Y1-201ENST00000421178 764 ntBASIC16.79■□□□□ 0.28
CCL2P13500 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.79■□□□□ 0.28
CCL2P13500 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL2P13500 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL2P13500 AC066615.1-201ENST00000640911 628 ntBASIC16.79■□□□□ 0.28
CCL2P13500 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCL2P13500 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL2P13500 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL2P13500 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL2P13500 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL2P13500 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCL2P13500 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL2P13500 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL2P13500 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CCL2P13500 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 AL353807.1-201ENST00000427475 662 ntBASIC16.78■□□□□ 0.28
CCL2P13500 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCL2P13500 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL2P13500 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL2P13500 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCL2P13500 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL2P13500 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL2P13500 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL2P13500 AL032819.2-201ENST00000624543 2162 ntBASIC16.78■□□□□ 0.28
CCL2P13500 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL2P13500 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCL2P13500 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCL2P13500 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL2P13500 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms