Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.19■□□□□ 0.18
CD74P04233 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CD74P04233 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.19■□□□□ 0.18
CD74P04233 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.19■□□□□ 0.18
CD74P04233 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 AC013268.1-206ENST00000638368 961 ntBASIC16.19■□□□□ 0.18
CD74P04233 AC112229.1-201ENST00000639295 961 ntBASIC16.19■□□□□ 0.18
CD74P04233 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CD74P04233 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.19■□□□□ 0.18
CD74P04233 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.19■□□□□ 0.18
CD74P04233 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD74P04233 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.18■□□□□ 0.18
CD74P04233 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.18■□□□□ 0.18
CD74P04233 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD74P04233 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.18■□□□□ 0.18
CD74P04233 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.18■□□□□ 0.18
CD74P04233 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.18■□□□□ 0.18
CD74P04233 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CD74P04233 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CD74P04233 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD74P04233 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD74P04233 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.18■□□□□ 0.18
CD74P04233 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
CD74P04233 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.18■□□□□ 0.18
CD74P04233 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD74P04233 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.18■□□□□ 0.18
CD74P04233 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.17■□□□□ 0.18
CD74P04233 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.17■□□□□ 0.18
CD74P04233 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.17■□□□□ 0.18
CD74P04233 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.17■□□□□ 0.18
CD74P04233 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.17■□□□□ 0.18
CD74P04233 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.17■□□□□ 0.18
CD74P04233 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.17■□□□□ 0.18
CD74P04233 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.17■□□□□ 0.18
CD74P04233 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.17■□□□□ 0.18
CD74P04233 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD74P04233 AC083906.6-201ENST00000641366 219 ntBASIC16.17■□□□□ 0.18
CD74P04233 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CD74P04233 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD74P04233 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD74P04233 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms