Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.6■□□□□ 0.73
MT-ND3P03897 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.6■□□□□ 0.73
MT-ND3P03897 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 CROCCP3-202ENST00000420820 1947 ntBASIC19.6■□□□□ 0.73
MT-ND3P03897 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.6■□□□□ 0.73
MT-ND3P03897 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND3P03897 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MT-ND3P03897 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
MT-ND3P03897 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
MT-ND3P03897 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.59■□□□□ 0.73
MT-ND3P03897 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MT-ND3P03897 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.59■□□□□ 0.73
MT-ND3P03897 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.59■□□□□ 0.73
MT-ND3P03897 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
MT-ND3P03897 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.59■□□□□ 0.73
MT-ND3P03897 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.59■□□□□ 0.73
MT-ND3P03897 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MT-ND3P03897 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.59■□□□□ 0.73
MT-ND3P03897 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MT-ND3P03897 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.59■□□□□ 0.73
MT-ND3P03897 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND3P03897 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND3P03897 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND3P03897 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND3P03897 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND3P03897 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.58■□□□□ 0.73
MT-ND3P03897 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND3P03897 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.58■□□□□ 0.73
MT-ND3P03897 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND3P03897 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.58■□□□□ 0.73
MT-ND3P03897 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND3P03897 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND3P03897 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MT-ND3P03897 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND3P03897 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.58■□□□□ 0.72
MT-ND3P03897 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MT-ND3P03897 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.58■□□□□ 0.72
MT-ND3P03897 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.58■□□□□ 0.72
MT-ND3P03897 AC023632.3-201ENST00000521633 145 ntBASIC19.58■□□□□ 0.72
MT-ND3P03897 UNC93B5-201ENST00000530315 699 ntBASIC19.58■□□□□ 0.72
MT-ND3P03897 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.58■□□□□ 0.72
MT-ND3P03897 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND3P03897 AL161938.1-201ENST00000569833 2180 ntBASIC19.58■□□□□ 0.72
MT-ND3P03897 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.58■□□□□ 0.72
MT-ND3P03897 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND3P03897 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
MT-ND3P03897 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND3P03897 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.58■□□□□ 0.72
MT-ND3P03897 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.58■□□□□ 0.72
MT-ND3P03897 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND3P03897 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
MT-ND3P03897 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND3P03897 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND3P03897 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
MT-ND3P03897 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND3P03897 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
MT-ND3P03897 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.57■□□□□ 0.72
MT-ND3P03897 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.57■□□□□ 0.72
MT-ND3P03897 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MT-ND3P03897 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.57■□□□□ 0.72
MT-ND3P03897 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MT-ND3P03897 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
MT-ND3P03897 KRT17P1-201ENST00000399211 1546 ntBASIC19.57■□□□□ 0.72
MT-ND3P03897 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.57■□□□□ 0.72
MT-ND3P03897 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.57■□□□□ 0.72
MT-ND3P03897 PRORSD1P-201ENST00000295112 541 ntBASIC19.57■□□□□ 0.72
MT-ND3P03897 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 AL355472.2-201ENST00000422958 438 ntBASIC19.57■□□□□ 0.72
MT-ND3P03897 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.57■□□□□ 0.72
MT-ND3P03897 AC026366.1-201ENST00000488803 879 ntBASIC19.57■□□□□ 0.72
MT-ND3P03897 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.57■□□□□ 0.72
MT-ND3P03897 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MT-ND3P03897 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.57■□□□□ 0.72
MT-ND3P03897 AP006294.2-201ENST00000641667 209 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms