Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.3■□□□□ 0.36
HLA-DQA2P01906 NCF1B-203ENST00000435988 1254 ntBASIC17.3■□□□□ 0.36
HLA-DQA2P01906 RPS2P52-201ENST00000469610 820 ntBASIC17.3■□□□□ 0.36
HLA-DQA2P01906 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA2P01906 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 LINC01465-201ENST00000408887 1940 ntBASIC17.29■□□□□ 0.36
HLA-DQA2P01906 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA2P01906 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA2P01906 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQA2P01906 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms