Protein–RNA interactions for Protein: P00746

CFD, Complement factor D, humanhuman

Predicted RBP Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP00746 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFDP00746 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CFDP00746 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFDP00746 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFDP00746 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.02■□□□□ 0.16
CFDP00746 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CFDP00746 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CFDP00746 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.02■□□□□ 0.16
CFDP00746 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.02■□□□□ 0.16
CFDP00746 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.02■□□□□ 0.16
CFDP00746 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.02■□□□□ 0.16
CFDP00746 AC120498.10-201ENST00000621827 505 ntBASIC16.02■□□□□ 0.16
CFDP00746 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.02■□□□□ 0.16
CFDP00746 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CFDP00746 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CFDP00746 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CFDP00746 AC073592.3-201ENST00000625118 1834 ntBASIC16.02■□□□□ 0.16
CFDP00746 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFDP00746 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFDP00746 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CFDP00746 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CFDP00746 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CFDP00746 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFDP00746 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CFDP00746 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CFDP00746 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.01■□□□□ 0.15
CFDP00746 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CFDP00746 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
CFDP00746 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.01■□□□□ 0.15
CFDP00746 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 MIR939-201ENST00000401314 82 ntBASIC16.01■□□□□ 0.15
CFDP00746 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.01■□□□□ 0.15
CFDP00746 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 AL358852.1-201ENST00000623174 1268 ntBASIC16.01■□□□□ 0.15
CFDP00746 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CFDP00746 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CFDP00746 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.01■□□□□ 0.15
CFDP00746 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 AC138932.1-201ENST00000534164 6830 ntBASIC16.01■□□□□ 0.15
CFDP00746 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.01■□□□□ 0.15
CFDP00746 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFDP00746 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CFDP00746 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16■□□□□ 0.15
CFDP00746 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16■□□□□ 0.15
CFDP00746 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CFDP00746 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16■□□□□ 0.15
CFDP00746 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16■□□□□ 0.15
CFDP00746 GOLGA2P11-201ENST00000562660 1621 ntBASIC16■□□□□ 0.15
CFDP00746 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16■□□□□ 0.15
CFDP00746 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16■□□□□ 0.15
CFDP00746 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16■□□□□ 0.15
CFDP00746 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CFDP00746 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFDP00746 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CFDP00746 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CFDP00746 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFDP00746 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.99■□□□□ 0.15
CFDP00746 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms