Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX4O95219 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX4O95219 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX4O95219 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX4O95219 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX4O95219 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SNX4O95219 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SNX4O95219 AC116351.2-201ENST00000606540 1585 ntBASIC18.08■□□□□ 0.48
SNX4O95219 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX4O95219 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX4O95219 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
SNX4O95219 NBPF21P-201ENST00000425093 1451 ntBASIC18.07■□□□□ 0.48
SNX4O95219 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SNX4O95219 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.07■□□□□ 0.48
SNX4O95219 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNX4O95219 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX4O95219 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNX4O95219 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.07■□□□□ 0.48
SNX4O95219 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.07■□□□□ 0.48
SNX4O95219 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.07■□□□□ 0.48
SNX4O95219 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.07■□□□□ 0.48
SNX4O95219 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 AC004264.1-201ENST00000608354 794 ntBASIC18.07■□□□□ 0.48
SNX4O95219 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.07■□□□□ 0.48
SNX4O95219 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.07■□□□□ 0.48
SNX4O95219 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX4O95219 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 AL158211.5-201ENST00000623583 2518 ntBASIC18.06■□□□□ 0.48
SNX4O95219 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SNX4O95219 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.06■□□□□ 0.48
SNX4O95219 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.06■□□□□ 0.48
SNX4O95219 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.06■□□□□ 0.48
SNX4O95219 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.06■□□□□ 0.48
SNX4O95219 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SNX4O95219 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SNX4O95219 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX4O95219 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX4O95219 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SNX4O95219 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX4O95219 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX4O95219 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SNX4O95219 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SNX4O95219 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SNX4O95219 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 MIR718-201ENST00000390190 70 ntBASIC18.05■□□□□ 0.48
SNX4O95219 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.05■□□□□ 0.48
SNX4O95219 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.05■□□□□ 0.48
SNX4O95219 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.05■□□□□ 0.48
SNX4O95219 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX4O95219 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.05■□□□□ 0.48
SNX4O95219 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.05■□□□□ 0.48
SNX4O95219 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.05■□□□□ 0.48
SNX4O95219 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX4O95219 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SNX4O95219 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 AC018553.1-201ENST00000616682 1458 ntBASIC18.05■□□□□ 0.48
SNX4O95219 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms