Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
LRCH4O75427 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRCH4O75427 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.06■□□□□ 0.8
LRCH4O75427 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRCH4O75427 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LRCH4O75427 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRCH4O75427 TSPY20P-201ENST00000450910 630 ntBASIC20.06■□□□□ 0.8
LRCH4O75427 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LRCH4O75427 C1QBPP2-201ENST00000528754 825 ntBASIC20.06■□□□□ 0.8
LRCH4O75427 AL160286.2-201ENST00000567150 934 ntBASIC20.06■□□□□ 0.8
LRCH4O75427 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.06■□□□□ 0.8
LRCH4O75427 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.06■□□□□ 0.8
LRCH4O75427 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LRCH4O75427 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
LRCH4O75427 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 IRX1P1-201ENST00000438849 1838 ntBASIC20.06■□□□□ 0.8
LRCH4O75427 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.06■□□□□ 0.8
LRCH4O75427 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRCH4O75427 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.06■□□□□ 0.8
LRCH4O75427 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.06■□□□□ 0.8
LRCH4O75427 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRCH4O75427 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH4O75427 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRCH4O75427 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRCH4O75427 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH4O75427 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH4O75427 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LRCH4O75427 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.05■□□□□ 0.8
LRCH4O75427 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.05■□□□□ 0.8
LRCH4O75427 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.05■□□□□ 0.8
LRCH4O75427 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.05■□□□□ 0.8
LRCH4O75427 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH4O75427 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH4O75427 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LRCH4O75427 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LRCH4O75427 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.05■□□□□ 0.8
LRCH4O75427 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH4O75427 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.05■□□□□ 0.8
LRCH4O75427 AC004408.2-201ENST00000623613 2777 ntBASIC20.05■□□□□ 0.8
LRCH4O75427 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH4O75427 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
LRCH4O75427 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
LRCH4O75427 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRCH4O75427 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.04■□□□□ 0.8
LRCH4O75427 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.04■□□□□ 0.8
LRCH4O75427 RPPH1-201ENST00000516869 333 ntBASIC20.04■□□□□ 0.8
LRCH4O75427 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.04■□□□□ 0.8
LRCH4O75427 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.04■□□□□ 0.8
LRCH4O75427 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.04■□□□□ 0.8
LRCH4O75427 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.04■□□□□ 0.8
LRCH4O75427 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.04■□□□□ 0.8
LRCH4O75427 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.04■□□□□ 0.8
LRCH4O75427 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LRCH4O75427 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 FP475955.4-201ENST00000623131 1990 ntBASIC20.04■□□□□ 0.8
LRCH4O75427 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LRCH4O75427 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRCH4O75427 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH4O75427 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
LRCH4O75427 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRCH4O75427 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH4O75427 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH4O75427 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LRCH4O75427 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 FAM201B-201ENST00000458407 597 ntBASIC20.03■□□□□ 0.8
LRCH4O75427 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.03■□□□□ 0.8
LRCH4O75427 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.03■□□□□ 0.8
LRCH4O75427 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.03■□□□□ 0.8
LRCH4O75427 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
LRCH4O75427 ITM2C-210ENST00000620962 501 ntBASIC20.03■□□□□ 0.8
LRCH4O75427 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 AC093503.3-201ENST00000624917 2352 ntBASIC20.03■□□□□ 0.8
LRCH4O75427 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms