Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.15■□□□□ 0.5
PLOD3O60568 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PLOD3O60568 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PLOD3O60568 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.15■□□□□ 0.5
PLOD3O60568 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.15■□□□□ 0.5
PLOD3O60568 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.15■□□□□ 0.5
PLOD3O60568 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.15■□□□□ 0.5
PLOD3O60568 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PLOD3O60568 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.15■□□□□ 0.5
PLOD3O60568 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PLOD3O60568 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.15■□□□□ 0.5
PLOD3O60568 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
PLOD3O60568 AC005332.7-201ENST00000614046 2005 ntBASIC18.15■□□□□ 0.5
PLOD3O60568 ZNF815P-204ENST00000434898 1737 ntBASIC18.15■□□□□ 0.5
PLOD3O60568 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PLOD3O60568 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PLOD3O60568 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PLOD3O60568 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PLOD3O60568 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.14■□□□□ 0.49
PLOD3O60568 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 FAM201B-201ENST00000458407 597 ntBASIC18.14■□□□□ 0.49
PLOD3O60568 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 AC124016.1-201ENST00000609552 612 ntBASIC18.14■□□□□ 0.49
PLOD3O60568 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PLOD3O60568 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PLOD3O60568 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PLOD3O60568 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PLOD3O60568 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PLOD3O60568 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PLOD3O60568 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.14■□□□□ 0.49
PLOD3O60568 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PLOD3O60568 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PLOD3O60568 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PLOD3O60568 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PLOD3O60568 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.13■□□□□ 0.49
PLOD3O60568 KRASP1-201ENST00000407852 552 ntBASIC18.13■□□□□ 0.49
PLOD3O60568 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.13■□□□□ 0.49
PLOD3O60568 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.13■□□□□ 0.49
PLOD3O60568 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PLOD3O60568 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PLOD3O60568 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.13■□□□□ 0.49
PLOD3O60568 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PLOD3O60568 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.12■□□□□ 0.49
PLOD3O60568 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.12■□□□□ 0.49
PLOD3O60568 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PLOD3O60568 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 TSPY20P-201ENST00000450910 630 ntBASIC18.12■□□□□ 0.49
PLOD3O60568 KRT16P5-201ENST00000455284 522 ntBASIC18.12■□□□□ 0.49
PLOD3O60568 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.12■□□□□ 0.49
PLOD3O60568 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PLOD3O60568 AC110285.5-201ENST00000611501 352 ntBASIC18.12■□□□□ 0.49
PLOD3O60568 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.12■□□□□ 0.49
PLOD3O60568 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 ITM2C-210ENST00000620962 501 ntBASIC18.12■□□□□ 0.49
PLOD3O60568 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.12■□□□□ 0.49
PLOD3O60568 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.12■□□□□ 0.49
PLOD3O60568 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PLOD3O60568 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PLOD3O60568 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.12■□□□□ 0.49
PLOD3O60568 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PLOD3O60568 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms