Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.28■□□□□ 0.36
CXCL13O43927 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CXCL13O43927 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.28■□□□□ 0.36
CXCL13O43927 AC011298.2-201ENST00000617989 482 ntBASIC17.28■□□□□ 0.36
CXCL13O43927 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.28■□□□□ 0.36
CXCL13O43927 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
CXCL13O43927 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL13O43927 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL13O43927 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL13O43927 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL13O43927 UNC93B2-201ENST00000285383 730 ntBASIC17.27■□□□□ 0.36
CXCL13O43927 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.27■□□□□ 0.36
CXCL13O43927 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.27■□□□□ 0.36
CXCL13O43927 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.27■□□□□ 0.36
CXCL13O43927 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.27■□□□□ 0.36
CXCL13O43927 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.27■□□□□ 0.36
CXCL13O43927 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.27■□□□□ 0.36
CXCL13O43927 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.27■□□□□ 0.36
CXCL13O43927 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCL13O43927 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCL13O43927 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CXCL13O43927 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCL13O43927 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.27■□□□□ 0.35
CXCL13O43927 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CXCL13O43927 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCL13O43927 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CXCL13O43927 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCL13O43927 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCL13O43927 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCL13O43927 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 AC091390.4-202ENST00000476426 537 ntBASIC17.26■□□□□ 0.35
CXCL13O43927 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCL13O43927 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CXCL13O43927 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCL13O43927 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CXCL13O43927 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCL13O43927 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCL13O43927 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CXCL13O43927 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.26■□□□□ 0.35
CXCL13O43927 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CXCL13O43927 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CXCL13O43927 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCL13O43927 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 SDHAP1-207ENST00000440850 2000 ntBASIC17.25■□□□□ 0.35
CXCL13O43927 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CXCL13O43927 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CXCL13O43927 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CXCL13O43927 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCL13O43927 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.25■□□□□ 0.35
CXCL13O43927 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCL13O43927 AC008040.2-201ENST00000461049 708 ntBASIC17.25■□□□□ 0.35
CXCL13O43927 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCL13O43927 BX088651.1-201ENST00000540551 451 ntBASIC17.25■□□□□ 0.35
CXCL13O43927 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCL13O43927 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.25■□□□□ 0.35
CXCL13O43927 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 AP000525.1-201ENST00000608286 694 ntBASIC17.25■□□□□ 0.35
CXCL13O43927 AC130371.2-201ENST00000619443 611 ntBASIC17.25■□□□□ 0.35
CXCL13O43927 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCL13O43927 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CXCL13O43927 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCL13O43927 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCL13O43927 AC079598.2-202ENST00000546624 1451 ntBASIC17.24■□□□□ 0.35
CXCL13O43927 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CXCL13O43927 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCL13O43927 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CXCL13O43927 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCL13O43927 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.24■□□□□ 0.35
CXCL13O43927 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.24■□□□□ 0.35
CXCL13O43927 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.24■□□□□ 0.35
CXCL13O43927 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CXCL13O43927 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCL13O43927 KRT8P41-201ENST00000533985 1514 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms