Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF3IP2O43734 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 AC141586.3-201ENST00000562166 1838 ntBASIC17.17■□□□□ 0.34
TRAF3IP2O43734 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 NIFKP9-201ENST00000419265 221 ntBASIC17.17■□□□□ 0.34
TRAF3IP2O43734 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 RARRES2P10-201ENST00000564312 460 ntBASIC17.17■□□□□ 0.34
TRAF3IP2O43734 AL160286.2-201ENST00000567150 934 ntBASIC17.17■□□□□ 0.34
TRAF3IP2O43734 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 AL353708.3-201ENST00000610272 989 ntBASIC17.17■□□□□ 0.34
TRAF3IP2O43734 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRAF3IP2O43734 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 AC142381.4-202ENST00000563973 229 ntBASIC17.16■□□□□ 0.34
TRAF3IP2O43734 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 AL445675.2-201ENST00000620291 557 ntBASIC17.16■□□□□ 0.34
TRAF3IP2O43734 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAF3IP2O43734 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAF3IP2O43734 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRAF3IP2O43734 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms