Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.74■□□□□ 0.27
XRCC2O43543 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC2O43543 AC120498.9-201ENST00000339021 3867 ntBASIC16.73■□□□□ 0.27
XRCC2O43543 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
XRCC2O43543 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.73■□□□□ 0.27
XRCC2O43543 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
XRCC2O43543 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC2O43543 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 HCG11-201ENST00000411553 5696 ntBASIC16.73■□□□□ 0.27
XRCC2O43543 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.73■□□□□ 0.27
XRCC2O43543 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.73■□□□□ 0.27
XRCC2O43543 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
XRCC2O43543 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.73■□□□□ 0.27
XRCC2O43543 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC2O43543 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.73■□□□□ 0.27
XRCC2O43543 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.73■□□□□ 0.27
XRCC2O43543 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.73■□□□□ 0.27
XRCC2O43543 MTDHP1-201ENST00000605323 784 ntBASIC16.73■□□□□ 0.27
XRCC2O43543 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.73■□□□□ 0.27
XRCC2O43543 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
XRCC2O43543 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 AC104417.2-201ENST00000562989 1793 ntBASIC16.73■□□□□ 0.27
XRCC2O43543 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.73■□□□□ 0.27
XRCC2O43543 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.73■□□□□ 0.27
XRCC2O43543 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
XRCC2O43543 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
XRCC2O43543 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
XRCC2O43543 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
XRCC2O43543 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC2O43543 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC2O43543 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.73■□□□□ 0.27
XRCC2O43543 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC2O43543 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
XRCC2O43543 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
XRCC2O43543 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC2O43543 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.72■□□□□ 0.27
XRCC2O43543 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
XRCC2O43543 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.72■□□□□ 0.27
XRCC2O43543 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC2O43543 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
XRCC2O43543 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC2O43543 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
XRCC2O43543 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
XRCC2O43543 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC2O43543 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC2O43543 AP000974.1-201ENST00000623909 2387 ntBASIC16.71■□□□□ 0.27
XRCC2O43543 AC141586.3-201ENST00000562166 1838 ntBASIC16.71■□□□□ 0.27
XRCC2O43543 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC2O43543 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
XRCC2O43543 ESRRAP1-201ENST00000400596 1257 ntBASIC16.71■□□□□ 0.27
XRCC2O43543 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC2O43543 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC2O43543 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.71■□□□□ 0.27
XRCC2O43543 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC2O43543 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.71■□□□□ 0.27
XRCC2O43543 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC2O43543 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC2O43543 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.71■□□□□ 0.27
XRCC2O43543 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms