Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FOXN1O15353 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FOXN1O15353 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FOXN1O15353 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FOXN1O15353 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FOXN1O15353 ZNF444P1-201ENST00000559497 298 ntBASIC23.04■■□□□ 1.28
FOXN1O15353 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.04■■□□□ 1.28
FOXN1O15353 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.04■■□□□ 1.28
FOXN1O15353 AC104692.2-201ENST00000603054 253 ntBASIC23.04■■□□□ 1.28
FOXN1O15353 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
FOXN1O15353 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FOXN1O15353 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FOXN1O15353 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.04■■□□□ 1.28
FOXN1O15353 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FOXN1O15353 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
FOXN1O15353 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.04■■□□□ 1.28
FOXN1O15353 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.04■■□□□ 1.28
FOXN1O15353 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.04■■□□□ 1.28
FOXN1O15353 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXN1O15353 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.03■■□□□ 1.28
FOXN1O15353 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.03■■□□□ 1.28
FOXN1O15353 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXN1O15353 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXN1O15353 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.03■■□□□ 1.28
FOXN1O15353 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.03■■□□□ 1.28
FOXN1O15353 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.03■■□□□ 1.28
FOXN1O15353 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.03■■□□□ 1.28
FOXN1O15353 AC117500.6-201ENST00000624871 588 ntBASIC23.03■■□□□ 1.28
FOXN1O15353 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FOXN1O15353 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXN1O15353 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
FOXN1O15353 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.03■■□□□ 1.28
FOXN1O15353 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
FOXN1O15353 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.03■■□□□ 1.28
FOXN1O15353 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
FOXN1O15353 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXN1O15353 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.02■■□□□ 1.28
FOXN1O15353 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.02■■□□□ 1.28
FOXN1O15353 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
FOXN1O15353 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.02■■□□□ 1.28
FOXN1O15353 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
FOXN1O15353 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
FOXN1O15353 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.02■■□□□ 1.28
FOXN1O15353 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.02■■□□□ 1.28
FOXN1O15353 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
FOXN1O15353 AC092329.2-201ENST00000598402 547 ntBASIC23.02■■□□□ 1.28
FOXN1O15353 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
FOXN1O15353 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.02■■□□□ 1.28
FOXN1O15353 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.02■■□□□ 1.28
FOXN1O15353 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.02■■□□□ 1.28
FOXN1O15353 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXN1O15353 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXN1O15353 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXN1O15353 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FOXN1O15353 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXN1O15353 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXN1O15353 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FOXN1O15353 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
FOXN1O15353 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
FOXN1O15353 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.01■■□□□ 1.27
FOXN1O15353 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXN1O15353 EMBP1-201ENST00000458200 901 ntBASIC23.01■■□□□ 1.27
FOXN1O15353 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXN1O15353 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
FOXN1O15353 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.01■■□□□ 1.27
FOXN1O15353 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.01■■□□□ 1.27
FOXN1O15353 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
FOXN1O15353 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXN1O15353 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23■■□□□ 1.27
FOXN1O15353 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXN1O15353 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
FOXN1O15353 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23■■□□□ 1.27
FOXN1O15353 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXN1O15353 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23■■□□□ 1.27
FOXN1O15353 HMGN1P19-201ENST00000436976 333 ntBASIC23■■□□□ 1.27
FOXN1O15353 AC079776.4-201ENST00000511039 504 ntBASIC23■■□□□ 1.27
FOXN1O15353 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
FOXN1O15353 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23■■□□□ 1.27
FOXN1O15353 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXN1O15353 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXN1O15353 AC099778.1-201ENST00000568593 1911 ntBASIC23■■□□□ 1.27
FOXN1O15353 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.99■■□□□ 1.27
FOXN1O15353 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.99■■□□□ 1.27
FOXN1O15353 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXN1O15353 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXN1O15353 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXN1O15353 AC004980.1-204ENST00000429707 299 ntBASIC22.99■■□□□ 1.27
FOXN1O15353 SLC25A1P2-201ENST00000430693 912 ntBASIC22.99■■□□□ 1.27
FOXN1O15353 AC112907.2-201ENST00000448639 330 ntBASIC22.99■■□□□ 1.27
FOXN1O15353 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.99■■□□□ 1.27
FOXN1O15353 AL160237.2-201ENST00000556165 472 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms