Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 AL031598.1-201ENST00000561511 1773 ntBASIC17.84■□□□□ 0.45
TNFRSF11BO00300 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 BCL2-203ENST00000589955 5011 ntBASIC17.83■□□□□ 0.45
TNFRSF11BO00300 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF11BO00300 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF11BO00300 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF11BO00300 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF11BO00300 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF11BO00300 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.83■□□□□ 0.45
TNFRSF11BO00300 AC090164.3-201ENST00000610780 2143 ntBASIC17.83■□□□□ 0.45
TNFRSF11BO00300 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF11BO00300 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.83■□□□□ 0.44
TNFRSF11BO00300 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 OR10C1-204ENST00000622521 1039 ntBASIC17.83■□□□□ 0.44
TNFRSF11BO00300 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.83■□□□□ 0.44
TNFRSF11BO00300 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 Z98044.1-201ENST00000632503 1764 ntBASIC17.82■□□□□ 0.44
TNFRSF11BO00300 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 AL390961.4-201ENST00000623958 2535 ntBASIC17.82■□□□□ 0.44
TNFRSF11BO00300 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF11BO00300 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 BID-214ENST00000617586 542 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 AC231657.2-201ENST00000624556 255 ntBASIC17.81■□□□□ 0.44
TNFRSF11BO00300 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 AC093525.10-201ENST00000625130 1569 ntBASIC17.81■□□□□ 0.44
TNFRSF11BO00300 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF11BO00300 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 AC135050.7-201ENST00000624508 2218 ntBASIC17.8■□□□□ 0.44
TNFRSF11BO00300 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 AC007322.1-201ENST00000426983 750 ntBASIC17.8■□□□□ 0.44
TNFRSF11BO00300 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.8■□□□□ 0.44
TNFRSF11BO00300 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms