Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC188H7C350 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CCDC188H7C350 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
CCDC188H7C350 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
CCDC188H7C350 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC188H7C350 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC188H7C350 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC188H7C350 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC188H7C350 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC188H7C350 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.04■□□□□ 0.8
CCDC188H7C350 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC188H7C350 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC188H7C350 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC188H7C350 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 AC007322.1-201ENST00000426983 750 ntBASIC20.03■□□□□ 0.8
CCDC188H7C350 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC188H7C350 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC188H7C350 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC188H7C350 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC188H7C350 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC188H7C350 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC188H7C350 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC188H7C350 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC188H7C350 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC188H7C350 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 LSM12P1-201ENST00000411836 588 ntBASIC20.02■□□□□ 0.8
CCDC188H7C350 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC188H7C350 AC006015.1-201ENST00000429970 570 ntBASIC20.02■□□□□ 0.8
CCDC188H7C350 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC188H7C350 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC188H7C350 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC188H7C350 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC188H7C350 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC188H7C350 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC188H7C350 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC188H7C350 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC188H7C350 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC188H7C350 AL390719.1-204ENST00000412397 1219 ntBASIC20.01■□□□□ 0.79
CCDC188H7C350 AC093787.1-201ENST00000450396 207 ntBASIC20.01■□□□□ 0.79
CCDC188H7C350 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC188H7C350 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC188H7C350 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC188H7C350 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC188H7C350 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC188H7C350 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 FEM1AP3-201ENST00000403722 1741 ntBASIC20.01■□□□□ 0.79
CCDC188H7C350 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC188H7C350 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC188H7C350 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20■□□□□ 0.79
CCDC188H7C350 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20■□□□□ 0.79
CCDC188H7C350 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms