Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 NOC2LP1-202ENST00000452600 2235 ntBASIC19.95■□□□□ 0.78
SRRM3A6NNA2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM3A6NNA2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM3A6NNA2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM3A6NNA2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRRM3A6NNA2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 AL049597.2-201ENST00000565575 961 ntBASIC19.94■□□□□ 0.78
SRRM3A6NNA2 HLA-B-256ENST00000639848 1089 ntBASIC19.94■□□□□ 0.78
SRRM3A6NNA2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 AC090164.3-201ENST00000610780 2143 ntBASIC19.94■□□□□ 0.78
SRRM3A6NNA2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.94■□□□□ 0.78
SRRM3A6NNA2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.94■□□□□ 0.78
SRRM3A6NNA2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 AL162412.1-201ENST00000567129 965 ntBASIC19.93■□□□□ 0.78
SRRM3A6NNA2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 BICD1-207ENST00000551848 1962 ntBASIC19.93■□□□□ 0.78
SRRM3A6NNA2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRRM3A6NNA2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 AC104581.1-202ENST00000635932 2618 ntBASIC19.92■□□□□ 0.78
SRRM3A6NNA2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SRRM3A6NNA2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 AL354751.1-201ENST00000412768 1863 ntBASIC19.91■□□□□ 0.78
SRRM3A6NNA2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 AL591742.1-201ENST00000604433 565 ntBASIC19.91■□□□□ 0.78
SRRM3A6NNA2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SRRM3A6NNA2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms