Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 IRX1P1-201ENST00000438849 1838 ntBASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM49BA6NDI0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 AC069544.1-201ENST00000609399 999 ntBASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM49BA6NDI0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM49BA6NDI0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 NBPF21P-201ENST00000425093 1451 ntBASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM49BA6NDI0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms