Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 AC141586.3-201ENST00000562166 1838 ntBASIC18.33■□□□□ 0.53
LRIT2A6NDA9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.33■□□□□ 0.53
LRIT2A6NDA9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 AC012618.2-201ENST00000428058 849 ntBASIC18.33■□□□□ 0.52
LRIT2A6NDA9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.33■□□□□ 0.52
LRIT2A6NDA9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 Z85996.1-201ENST00000494644 937 ntBASIC18.33■□□□□ 0.52
LRIT2A6NDA9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 Z99916.2-201ENST00000604037 246 ntBASIC18.33■□□□□ 0.52
LRIT2A6NDA9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT2A6NDA9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.32■□□□□ 0.52
LRIT2A6NDA9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 KRT8P41-201ENST00000533985 1514 ntBASIC18.32■□□□□ 0.52
LRIT2A6NDA9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT2A6NDA9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 FAM197Y1-201ENST00000421178 764 ntBASIC18.31■□□□□ 0.52
LRIT2A6NDA9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 AC008550.1-201ENST00000511500 884 ntBASIC18.31■□□□□ 0.52
LRIT2A6NDA9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 CD177P1-201ENST00000606252 935 ntBASIC18.31■□□□□ 0.52
LRIT2A6NDA9 AP001412.1-201ENST00000608405 714 ntBASIC18.31■□□□□ 0.52
LRIT2A6NDA9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 AP006294.2-201ENST00000641667 209 ntBASIC18.31■□□□□ 0.52
LRIT2A6NDA9 AL031985.4-201ENST00000642138 673 ntBASIC18.31■□□□□ 0.52
LRIT2A6NDA9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRIT2A6NDA9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT2A6NDA9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT2A6NDA9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT2A6NDA9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.3■□□□□ 0.52
LRIT2A6NDA9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LRIT2A6NDA9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT2A6NDA9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRIT2A6NDA9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms