Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 POU5F1P3-201ENST00000428824 1078 ntBASIC17.42■□□□□ 0.38
TMEM129A0AVI4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 FAM201B-201ENST00000458407 597 ntBASIC17.42■□□□□ 0.38
TMEM129A0AVI4 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 C2orf69P4-201ENST00000565394 541 ntBASIC17.42■□□□□ 0.38
TMEM129A0AVI4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM129A0AVI4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 UNC93B5-201ENST00000530315 699 ntBASIC17.41■□□□□ 0.38
TMEM129A0AVI4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 HLA-B-256ENST00000639848 1089 ntBASIC17.41■□□□□ 0.38
TMEM129A0AVI4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM129A0AVI4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 TEX21P-204ENST00000641479 1693 ntBASIC17.4■□□□□ 0.38
TMEM129A0AVI4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 AC060766.5-201ENST00000590539 871 ntBASIC17.4■□□□□ 0.38
TMEM129A0AVI4 AC090164.3-201ENST00000610780 2143 ntBASIC17.4■□□□□ 0.38
TMEM129A0AVI4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 AL031598.1-201ENST00000561511 1773 ntBASIC17.4■□□□□ 0.38
TMEM129A0AVI4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM129A0AVI4 AC093525.10-201ENST00000625130 1569 ntBASIC17.4■□□□□ 0.38
TMEM129A0AVI4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms