Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KRT16P5-201ENST00000455284 522 ntBASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MIR4785-201ENST00000585005 73 ntBASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC073912.3-201ENST00000624414 853 ntBASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV4S1A1TA0A5B7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC120498.9-201ENST00000339021 3867 ntBASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 HTR7P1-201ENST00000538670 1336 ntBASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms