Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 AC008406.3-201ENST00000620001 1374 ntBASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 KRT18P14-201ENST00000534205 1250 ntBASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 AC083906.6-201ENST00000641366 219 ntBASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 AC008764.6-201ENST00000595909 2069 ntBASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV3S1A0A5B6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 KRT18P61-201ENST00000585825 1298 ntBASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 AC073592.3-201ENST00000625118 1834 ntBASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TCRBV3S1A0A5B6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 AC013268.1-206ENST00000638368 961 ntBASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 AC112229.1-201ENST00000639295 961 ntBASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 FZD10-202ENST00000539839 3282 ntBASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 AL162741.1-201ENST00000565563 1558 ntBASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV3S1A0A5B6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms