Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 AL031432.3-201ENST00000607698 485 ntBASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 AC131212.1-201ENST00000613771 668 ntBASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 AC019069.1-201ENST00000610008 1333 ntBASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV34A0A0B4J273 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 AC008406.3-201ENST00000620001 1374 ntBASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 AC006333.2-201ENST00000607957 2099 ntBASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 AP000997.3-201ENST00000623333 2250 ntBASIC14.89□□□□□ -0.03
TRAV34A0A0B4J273 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 AL031963.3-201ENST00000606441 850 ntBASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 AC110285.6-201ENST00000617652 491 ntBASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 CROCCP1-201ENST00000426910 5675 ntBASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV34A0A0B4J273 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms