Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 ZNF815P-204ENST00000434898 1737 ntBASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 AC016769.1-201ENST00000409132 1010 ntBASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 AC010980.2-201ENST00000587099 1412 ntBASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV5A0A0B4J249 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 FP475955.4-201ENST00000623131 1990 ntBASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 AL390961.4-201ENST00000623958 2535 ntBASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV5A0A0B4J249 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV5A0A0B4J249 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRAV5A0A0B4J249 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV5A0A0B4J249 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAV5A0A0B4J249 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV5A0A0B4J249 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV5A0A0B4J249 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV5A0A0B4J249 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV5A0A0B4J249 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.96□□□□□ -0.02
TRAV5A0A0B4J249 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV5A0A0B4J249 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms